Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0846 ATGTTTACACTATTGAGTTTAGTTGGAGGGTGGTTGATTTATCTGTATGGGCCATATTGGAGAGTCAGAAAGGTTCCAGGCCCACCATCTCTGCCGTTGGTAGGACATCTTCATTTGCTTGCTAAACATGGTCCGGATGTTTTCTCAATACTTGCCAACCAATATGGTCCAATCTACAGATTTCACATGGGAAGACAACCACTAATAATAGTAGCAGATGCAGAACTGTGTAAAGAAGTAGGAATCAAAAAATTCAAAGACATTTCAAACAGAAGCACTCCTTCTCCCATTAAAGCTTCTCCACTTCACCAAAAGGGTCTCTTCTTCACCAAGGATTCACAATGGGCTACATTGAGAAACACGATTTTATCGGTATATCAACCGTCACATCTATCAAGATTAGTGCCAACAATGCAATCATTCATAGAATCTGCCACTCAAAATCTTGACTCAGAGAATGAAGATGTTGTCTTTTCTAATTTGTCGCTTAAACTCGCGACCGACGTGATTGGACAAGCAGCGTTCGGTGTCAACTTTGGTCTCTCTGAGCCTCATTCTGTTTGCAACGAAATCAAGAATGTTGGTGATAATGAAGTAACGGATTTTATCAATCAACACATATACTCGACAACTCAACTTAAGATGGATTTGTCGGGTTCGTTCTCAATCATACTTGGTTTACTTGTTCCGATTCTTCAAGAACCGTTTAGACAGATTTTGAAGCGAATACCGGGCACTATGGACTGGAAAATCGAGCGTACTAACAAAAAACTAGGCGGACGTCTTGATGAGATTGTGGAAAAGAGAATGAAAGATAGAACGCGTAGTTCGAAGGATTTCTTGTCGCTTATACTAAATGCTAGAGAATCAAAAGCTGTTTCGGAGAATGTGTTCACATCTGAATATATCAGTGCTGTTACTTATGAACACTTGCTCGCTGGCTCTGCAACCACTTCCTTTACGTTGTCTTCTGTAGTCTATTTGGTTGCTGCGCATCCAGAAGTCGAGAAAAAAATGGTTGAAGAGATTGATAGGTTTGGTTCAATAGACCAGATACCGACTTCTCAAGATCTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCAATGAGGATTTACATCGTATCGCCATTAGTTGCAAGAGAAACATCGAATGAAGTTGAAATCGGAGGTTACCATCTTCCAAAGGGAACTTGGGTTTGGTTAGCACTTGGTGTTCTAGCGAAAGATCCGAAAAACTTTTCAGAGCCAGAAAAGTTTAAACCAGAAAGGTTTGATCCTAACTGTGAAGAGATGAAGAGAAGGCACCCTTATGCTTTCATACCATTCGGAATCGGTCCTCGGGCTTGCATCGGTCAGAAATTTTCCCTTCAAGAGATTAAGCTTTCGCTCATTCATTTATACAGAAAATACTTGTTTCGGCATTCACCGAACATGGAAACCCCTTTAGAACTTGAATATGGCATAGTCCTTAACTTCAAGCATGGTGTCAAGCTTAGAGTCGTAAAAAGAACAAATTCGAAGGTCGAGGGATGA 1545 0.4065 MFTLLSLVGGWLIYLYGPYWRVRKVPGPPSLPLVGHLHLLAKHGPDVFSILANQYGPIYRFHMGRQPLIIVADAELCKEVGIKKFKDISNRSTPSPIKASPLHQKGLFFTKDSQWATLRNTILSVYQPSHLSRLVPTMQSFIESATQNLDSENEDVVFSNLSLKLATDVIGQAAFGVNFGLSEPHSVCNEIKNVGDNEVTDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNKKLGGRLDEIVEKRMKDRTRSSKDFLSLILNARESKAVSENVFTSEYISAVTYEHLLAGSATTSFTLSSVVYLVAAHPEVEKKMVEEIDRFGSIDQIPTSQDLHDKFPYLDQVIKEAMRIYIVSPLVARETSNEVEIGGYHLPKGTWVWLALGVLAKDPKNFSEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMETPLELEYGIVLNFKHGVKLRVVKRTNSKVEG* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0846 514 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 52 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 165 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Psa5g0846 514 Pfam Cytochrome P450 26 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PANTHER THROMBOXANE-A SYNTHASE 1 508 - -
Psa5g0846 514 Gene3D Cytochrome P450 15 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 SUPERFAMILY Cytochrome P450 19 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0846 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0846 Psa-Chr5 66576923 66581862 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0846 63 507 Cytochrome P450 AT2G26170 74.607 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0846 K20771 - gmx:100797803 900.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0492 6 16377971 16381352 Psa5g0846 5 66576923 66581862 PCT