Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0845 ATGGGTGCTTCTGGAAAATGGGTGAAAGCGTTAATCGGACTCAAAAAACACGACAAAGATGAACATGTGAAGGAGGGTGTCAAGAGTAAGAAATGGAGGTTATGGAGAAGTTCATCTGGTGATAACGGTTCCTGGAAAGGCTTTAAAGGTAACAACCATCACAAAGCAGTTTCTGAAGGTTCTGAATCTCCAACTGCAGCAGAAGCTTACACCGCCGCAGTAGCCACCGTTGTTAGAGCTCAACCTAAGGATTTTAGACTCGTTAGGCAAGAATGGGCTGCTATAAGAATTCAAACTACCTTCCGCGCCTTCTTGGCAAGGAGGGCTTTGAGGGCTTTGAAGGCGGTGGTGAGGATTCAAGCACTAGTTAGGGGTAGGCAAGTGAGGAAGCAAGCTGCAGTGACATTGAGGTGCATGCAGGCGTTGGTTCGTGTTCAGGCTCGAGTGAGGGCTCGTCGAGTGAGGATGTCGATGGAGGGACAAGCCGTGCAGAATATGCTCAATGAGCGGCGGACAAAGCTTGAACTTTTGAAGGATGCTGAGGAAGGGTGGTGTGATAGTATTGGAACATTGGAAGATGTGAAATCGAAGATTCAAATGAGGCAAGAAGGAGCTTTCAAAAGAGAGAGAGCACTTGCATACTCTCTTGCTCAGAAGCAATGCAGGCCAACTTCAAGCTCTAATTCACAAACAACCGCCTCGTTTTCCTCTCTCAAGAATCCCGAGATGAACAAAGCTAACGGGGGATGGAGTTGGTTGGAAAGATGGATGGCAGCCAAGCCTTGGGAGACAAGATTGATGGAACAATCCCATGCTGAAAGCTTAGATAAAACACCTCCACCGCCTCCGAAGAAATTCGCGGATCCCTTTGTAAGCTCTAATTCAAAACCATGCTCGGTCAATATCAAGAAGAACAATGTTACAACAAGGATTTCCGCGAAGCCTCCTCCCCACATCGGACAAGCTACTCGTTCGTCTTCAAGTCCAAGTTCCGAGTTTCGGTATGATGAAAGTTCTGCATCGTCTTCTATTTGTACATCCGCAACACCAATGTCAGGGAACACTTACGAAAGGACTGAGGATAGTGGTAACAACACTAGGCCAAATTACATGAACCTAACGCAATCAACCAAGGCGAAGCTGAAATCGGGCAATAATCCAATGTATAGCAGAGCTCAAAGGCAACAGTCAATGGACGAGTTTCAGTTTATGAGGAGGGCTGCAGGTTTCTCTAATGGAGATTCTAGAAGTATAGCTGCTTCTGACCATTCACTCAACTTTTCTAGGCCACTTCATCTACCAACTTCCATGGATAAAAGCTCGGTGAGGCCGCGGTGA 1338 0.4679 MGASGKWVKALIGLKKHDKDEHVKEGVKSKKWRLWRSSSGDNGSWKGFKGNNHHKAVSEGSESPTAAEAYTAAVATVVRAQPKDFRLVRQEWAAIRIQTTFRAFLARRALRALKAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRTKLELLKDAEEGWCDSIGTLEDVKSKIQMRQEGAFKRERALAYSLAQKQCRPTSSSNSQTTASFSSLKNPEMNKANGGWSWLERWMAAKPWETRLMEQSHAESLDKTPPPPPKKFADPFVSSNSKPCSVNIKKNNVTTRISAKPPPHIGQATRSSSSPSSEFRYDESSASSSICTSATPMSGNTYERTEDSGNNTRPNYMNLTQSTKAKLKSGNNPMYSRAQRQQSMDEFQFMRRAAGFSNGDSRSIAASDHSLNFSRPLHLPTSMDKSSVRPR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0845 445 MobiDBLite consensus disorder prediction 414 435 - -
Psa5g0845 445 MobiDBLite consensus disorder prediction 319 400 - -
Psa5g0845 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 444 - -
Psa5g0845 445 SMART iq_5 112 133 IPR000048 GO:0005515
Psa5g0845 445 SMART iq_5 89 111 IPR000048 GO:0005515
Psa5g0845 445 ProSiteProfiles IQ motif profile. 90 118 IPR000048 GO:0005515
Psa5g0845 445 Pfam Protein of unknown function (DUF4005) 337 417 IPR025064 -
Psa5g0845 445 Gene3D - 88 138 - -
Psa5g0845 445 ProSiteProfiles IQ motif profile. 114 141 IPR000048 GO:0005515
Psa5g0845 445 PANTHER IQ-DOMAIN 5-RELATED 1 444 - -
Psa5g0845 445 MobiDBLite consensus disorder prediction 306 445 - -
Psa5g0845 445 Pfam IQ calmodulin-binding motif 92 111 IPR000048 GO:0005515
Psa5g0845 445 Pfam IQ calmodulin-binding motif 114 131 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0845 Psa-Chr5 66574668 66576528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0845 1 439 IQD Protein Family AT2G26180 59.955 1.23e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0845 - - gmx:100799714 619.387