Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0843 ATGTCTTCTATAAGGGATTCACAATGGGCTACATTGAGAAACACGATTTTATCGGTATATCAACCGTCACATCTATCAAGATTAGTGCCAACAATGCAATCATTCATAGAATCTGCCACTCAAAATCTTGACTCAGAGAATGAAGATGTTGTCTTTTCTAATTTGTCGCTTAAACTCGCGACCGACGTGATTGGACAAGCAGCGTTCGGTGTCAACTTTGGTCTCTCTGAGCCTCATTCTGTTTGCAACGAAATCAAGAATGTTGGTGATAATGAAGTAACGGATTTTATCAATCAACACATATACTCGACAACTCAACTTAAGATGGATTTGTCGGGTTCGTTCTCAATCATACTTGGTTTACTTGTTCCGATTCTTCAAGAACCGTTTAGACAGATTTTGAAGCGAATACCGGGCACTATGGACTGGAAAATCGAGCGTACTAACAAAAAACTAGGCGGACGTCTTGATGAGATTGTGGAAAAGAGAATGAAAGATAGAACGCGTAGTTCGAAGGATTTCTTGTCGCTTATACTAAATGCTAGAGAATCAAAAGCTGTTTCGGAGAATGTGTTCACATCTGAATATATCAGTGCTGTTACTTATGAACACTTGCTCGCTGGCTCTGCAACCACTTCCTTTACGTTGTCTTCTGTAGTCTATTTGGTTGCTGCGCATCCAGAAGTCGAGAAAAAAATGGTTGAAGAGATTGATAGGTTTGGTTCAATAGACCAGATACCGACTTCTCAAGATCTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCAATGAGGATTTACATCGTATCGCCATTAGTTGCAAGAGAAACATCGAATGAAGTTGAAATCGGAGGTTACCATCTTCCAAAGGGAACTTGGGTTTGGTTAGCACTTGGTGTTCTAGCGAAAGATCCGAAAAACTTTTCAGAGCCAGAAAAGTTTAAACCAGAAAGGTTTGATCCTAACTGTGAAGAGATGAAGAGAAGGCACCCTTATGCTTTCATACCATTCGGAATCGGTCCTCGGGCTTGCATCGGTCAGAAATTTTCCCTTCAAGAGATTAAGCTTTCGCTCATTCATTTATACAGAAAATACTTGTTTCGGCATTCACCGAACATGGAAACCCCTTTAGAACTTGAATATGGCATAGTCCTTAACTTCAAGCATGGTGTCAAGCTTAGAGTCGTAAAAAGAACAAATTCGAAGGTCGAGGGATGA 1227 0.4042 MSSIRDSQWATLRNTILSVYQPSHLSRLVPTMQSFIESATQNLDSENEDVVFSNLSLKLATDVIGQAAFGVNFGLSEPHSVCNEIKNVGDNEVTDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNKKLGGRLDEIVEKRMKDRTRSSKDFLSLILNARESKAVSENVFTSEYISAVTYEHLLAGSATTSFTLSSVVYLVAAHPEVEKKMVEEIDRFGSIDQIPTSQDLHDKFPYLDQVIKEAMRIYIVSPLVARETSNEVEIGGYHLPKGTWVWLALGVLAKDPKNFSEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGQKFSLQEIKLSLIHLYRKYLFRHSPNMETPLELEYGIVLNFKHGVKLRVVKRTNSKVEG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0843 408 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 340 349 IPR017972 GO:0005506|GO:0016705
Psa5g0843 408 PRINTS P450 superfamily signature 207 224 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS P450 superfamily signature 261 272 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS P450 superfamily signature 338 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 Gene3D Cytochrome P450 1 406 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PANTHER THROMBOXANE-A SYNTHASE 4 402 - -
Psa5g0843 408 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS E-class P450 group I signature 196 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS E-class P450 group I signature 216 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS E-class P450 group I signature 260 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS E-class P450 group I signature 300 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS E-class P450 group I signature 337 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PRINTS E-class P450 group I signature 347 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 Pfam Cytochrome P450 7 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0843 408 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 402 - -
Psa5g0843 408 SUPERFAMILY Cytochrome P450 5 401 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0843 Psa-Chr5 66565099 66566558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0843 5 401 Cytochrome P450 AT2G26170 73.804 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0843 K20771 - gmx:100797803 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0843 5 66565099 66566558 Psa5g0843 5 66565099 66566558 ECH