Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0825 ATGACAGATAAAAATCCATATTCACCTGACAGTGATTTCACCAACCAGTGGCCTTTGGAGCCTTCTGAGTACTTGAAATTTGACGATGATCAATGGCCAGATGATAATCCAGAGCCATTTCTTGCCGAACATGTCACCAACCAAGACAATGAATTAGTAGCTGATTTTGGAGGAAGTGGAAGCCGAATCGAAGGACCAGCTTCCAGGAGTGAAGGTGAGAAGAAGGAAGTTAAAGATAAAGTTGCATTCAAAACAAAGTCAGAGGTTGAGATTCTGGATGATGGATTCAAGTGGAGGAAGTATGGAAAGAAGATGGTAAAAAACAGCCCTAATCCAAGGAACTATTATAGATGTTCTAAAGATGGATGCCAAGTGAAAAAGAGAGTTGAGAGAGATGTGGATGATCCGAGTTATGTGATAACAACCTATGAAGGCACACATACTCATCCAAGTTTTCACTAG 462 0.4069 MTDKNPYSPDSDFTNQWPLEPSEYLKFDDDQWPDDNPEPFLAEHVTNQDNELVADFGGSGSRIEGPASRSEGEKKEVKDKVAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSKDGCQVKKRVERDVDDPSYVITTYEGTHTHPSFH* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0825 153 MobiDBLite consensus disorder prediction 1 20 - -
Psa5g0825 153 SMART WRKY_cls 92 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g0825 153 SUPERFAMILY WRKY DNA-binding domain 85 151 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g0825 153 ProSiteProfiles WRKY domain profile. 87 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g0825 153 MobiDBLite consensus disorder prediction 55 76 - -
Psa5g0825 153 Pfam WRKY DNA -binding domain 93 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g0825 153 Gene3D WRKY domain 79 145 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g0825 153 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 8 152 - -
Psa5g0825 153 MobiDBLite consensus disorder prediction 1 18 - -
Psa5g0825 153 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 8 152 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0825 Psa-Chr5 65663044 65665236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0825 80 153 WRKY Transcription Factor Family AT5G26170 81.081 1.81e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa5g0825 WRKY 4.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0825 - - gmx:100819462 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0825 5 65663044 65665236 Psa5g0825 5 65663044 65665236 ECH