Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0819 ATGAGTTTAACAACAGTAGAAGACGATTCATCTTCCGAAATCCATTTACCAGCAGAAATTGACTGGCACATGCTAGACAAATCGAAGTTTTTCTTCCTCGGCGCCGCCTTATTCTCCGGCGTCTCCGCCGCACTTTATCCGATGGTGGTTTTAAAAACTCGGCAACAGGTTTCTTCTTCACACTACTCTTGTATCAACATGTCATGTGCTATTATGCGGTACGAAGGTTTTAGAGGCTTTTATAAAGGTTTTGGTACTTCTTTGATGGGGACTATCCCTGCTAGAGCACTTTACATGACAGCACTTGAGGTTACCAAGAGTAGCGTTGGTACTGCTTTTGTTGATTTGGGTTTTTCTGATAATACTGCTACTGCTGTTGCTAGTGCTGCAGCTGGTGTTACTTCAGCTATGTCTGCTCAGTTGGTTTGGACTCCGATTGATGTTGTTAGTCAGAGACTCATGGTTCAAGGTTGTAGTAGTGGTGGTGGCGGTGGTGGTCGTGGTGGAGGAAAGAGTATATTGGCGAATCTGAATTCGGAGAATTATAGAAATGGTTTAGATGTGTTTAGAAAAATTCTTTATAATGATGGGCCAAGAGGATTCTATAGAGGATTTGGGATTTCGATATTGACATATGCGCCATCGAATGCTGTTTGGTGGACTTCTTATTCTATGGTTCATAGGTTTATTTGGGGTAATTTTGGTTCATGTTTGTGTAAGAGTGGTAGTAATTTGGGTGGTGGTGATGGGTGTGTTGGTTATAGACCTGATTCTAAGGTTATGGTTGGTGTACAAGGTTTGAGTGCTGTTGTGGCTAGTGGTGTTTCTGCTATTGTGACAATGCCGTTTGATACTATTAAGACTAGGTTGCAGGTTTTGGATACGGAGGAGAATGGGAGAAGGCGGCCGTTAACTTTTGCGCAAACGGTTAGGAATTTGGTGAATGAAGGTGGTTTGTTTGCTTGTTACAAAGGATTGGGACCGAGGTGGGTGTCGATGTCTATGTCGGCTACGACTATGATTACTACTTATGAGTTCTTGAAACGCATGTCAACAAAGAGGCAAGATTAG 1071 0.4267 MSLTTVEDDSSSEIHLPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSSHYSCINMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMTALEVTKSSVGTAFVDLGFSDNTATAVASAAAGVTSAMSAQLVWTPIDVVSQRLMVQGCSSGGGGGGRGGGKSILANLNSENYRNGLDVFRKILYNDGPRGFYRGFGISILTYAPSNAVWWTSYSMVHRFIWGNFGSCLCKSGSNLGGGDGCVGYRPDSKVMVGVQGLSAVVASGVSAIVTMPFDTIKTRLQVLDTEENGRRRPLTFAQTVRNLVNEGGLFACYKGLGPRWVSMSMSATTMITTYEFLKRMSTKRQD* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0819 356 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Psa5g0819 356 PRINTS Mitochondrial carrier protein signature 202 220 IPR002067 GO:0055085
Psa5g0819 356 PRINTS Mitochondrial carrier protein signature 269 291 IPR002067 GO:0055085
Psa5g0819 356 Pfam Mitochondrial carrier protein 264 353 IPR018108 -
Psa5g0819 356 Pfam Mitochondrial carrier protein 124 232 IPR018108 -
Psa5g0819 356 Pfam Mitochondrial carrier protein 39 109 IPR018108 -
Psa5g0819 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 260 350 IPR018108 -
Psa5g0819 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Psa5g0819 356 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 356 - -
Psa5g0819 356 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 356 - -
Psa5g0819 356 Gene3D Mitochondrial carrier domain 29 356 IPR023395 -
Psa5g0819 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 229 IPR018108 -
Psa5g0819 356 SUPERFAMILY Mitochondrial carrier 23 347 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0819 Psa-Chr5 65482005 65484591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0819 13 356 Chloroplast and Mitochondria Gene Families AT5G26200 65.698 1.35e-159 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0819 K15121 - gmx:100784202 531.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0819 5 65482005 65484591 Psa5g0819 5 65482005 65484591 ECH