Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0813 ATGGGTGGTGAGGGTAGAGTTGAAATTGTGAGTGGTAAAGGGTGCTCGAGGTTGTTTTCATCTTCATTTACTTCAATCAGAGATCTTCAACCATTGGATCAAATGTCTCCTGTTTCAGCTTCTCCGCAAGTGTCATCAACTGCTCCTTTTGCTGGTCTTGTTATATGCGTTACTGGCTTATCTAAAGAAGCAAGGAATCAGGTCATGGAGGCCACAGAGAGATTAGGTGGCCAGTATAGCCCCAATCTGCATCCTCAATGTACTCATTTGGTGGTTCAGAACTTCGGTGGATGCAAATTTGAGCATGCGCTGAAGCATGGAGCAAAAAATGGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGATAGTGCCAAGAAAAATGTAAGGTTGACCGAATCACTTTATAGTCTGAAGAGATATGGAGATAATAATATGTACTTGGATGATTTTAGAGGGTATACAAATACTAGAAATTGTCTTCCTGCGAGAATCCATGAAACAACACATTCTCATCGTGCTGAAGAATTTCTAAGATTCTCTGGTAAAGAGTCTAACAGAAATTTGGACTCAACTTTGTCTGGTTGCTCCATCTATGTTGATCCACACATTTCATCCGAATTGCAGAACAAGGTTGTCGAGTCTGCTTCAAGAGAAGGTGCTAGTTTGGTGGAACAATGGTTTGTTGGTTGCAATGTTAGTCATGTAGTGACTGAAGGGACATCCATTCAAAGATATCTCGGATACTCTAGTAACCTCGTTACACCACTGTGGATTCTCAAAACAGCTAAGGAGAAACAAGTGCAGAGGCTTGTTAACATGTCTGTTGATTTGGCGAGACAAGTTGGCTTGATGCTCGAAGACGTTCATAATGGCCTTTCAGGAAAGGAAGTAGTAAAGACAAAAGTCCATGACGAACTTCAAGGCGGTAAAAGTGAAATTGGCTACGAAGAAAGACAACAAATTGTAAGTTCGGCAAAAAATGGTGTTAGAAGTCGCCGTGGTCGTCGTATGCAGACATGTCAGACGCCTATCCGGCCGATAACACCTAACAACCTTCTAGACTCTATCTGCTGGTCAATATCAGAGGCAACTTCAACTGCTTCCATTTACACAGACTCTTTCAGTGCTGAAGATCCTAGTGATAATCATACTTCAATATTTTTTGATGCAAAAGGGGATGCAAAGGACTCAGATGCTTCATTTTCGAACTCCACACGTCCTCTAACAGAAAGTGAGAAATCTGAGTTGGTATTTAAAAACCATTTTCTCACCATACTCTTCCCAGTTGACCGGTTTTCCGAGATCGGCCCTTCCTCAAGGACATTTTTCAACAAAAACGGTTTTACATGTCTTCAGGTGTTGGATCATATACATGCATTTTATCAGGAGAACATGTCAAGCCATGAAATAGAAGTGGCGATTCATACAGATTCAAGACACGCGGATAAGCTTCGATCAGTGTACTCGAGTAAGGAAACAGCGGAGCATGGTTATGCGATGTTCAAACGAACTGAATTTTTGGGGAGTCGTTCAAGTTTTGAAATGTTAAAGCGCGTGAGTGGAGACAACAACTCCAATGTGTATGAGTTATTACTTAGGGCGTAA 1605 0.4168 MGGEGRVEIVSGKGCSRLFSSSFTSIRDLQPLDQMSPVSASPQVSSTAPFAGLVICVTGLSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQNFGGCKFEHALKHGAKNGLFVVTLGWFVDSAKKNVRLTESLYSLKRYGDNNMYLDDFRGYTNTRNCLPARIHETTHSHRAEEFLRFSGKESNRNLDSTLSGCSIYVDPHISSELQNKVVESASREGASLVEQWFVGCNVSHVVTEGTSIQRYLGYSSNLVTPLWILKTAKEKQVQRLVNMSVDLARQVGLMLEDVHNGLSGKEVVKTKVHDELQGGKSEIGYEERQQIVSSAKNGVRSRRGRRMQTCQTPIRPITPNNLLDSICWSISEATSTASIYTDSFSAEDPSDNHTSIFFDAKGDAKDSDASFSNSTRPLTESEKSELVFKNHFLTILFPVDRFSEIGPSSRTFFNKNGFTCLQVLDHIHAFYQENMSSHEIEVAIHTDSRHADKLRSVYSSKETAEHGYAMFKRTEFLGSRSSFEMLKRVSGDNNSNVYELLLRA* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0813 534 Gene3D BRCT domain 48 139 IPR036420 -
Psa5g0813 534 CDD BRCT_TopBP1_rpt2_like 49 127 - -
Psa5g0813 534 ProSiteProfiles BRCT domain profile. 45 137 IPR001357 -
Psa5g0813 534 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 534 - -
Psa5g0813 534 SUPERFAMILY BRCT domain 47 137 IPR036420 -
Psa5g0813 534 ProSiteProfiles BRCT domain profile. 187 275 IPR001357 -
Psa5g0813 534 Pfam twin BRCT domain 53 119 IPR001357 -
Psa5g0813 534 SMART BRCT_7 47 127 IPR001357 -
Psa5g0813 534 SMART BRCT_7 189 265 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0813 49 137 Core DNA Replication Machinery Family AT1G77320 37.079 2.11e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0813 - - gmx:100815253 871.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0813 5 65209334 65214639 Psa5g0813 5 65209334 65214639 ECH