Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0811 ATGGGATATCTCAATTCAGTTTTGTCCTCTTCAAGTCAGGTTCATGCTATGGATGATGCACCTGTTAGCGGTGGTGGTCTCAGTCACAATGGAAAATTCAGCTATGGGTATGCTAGCTCGCCCGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTAGATGGTGAAATCGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGCGGTATTCGTGCGGCTGAGTATGTTAAGAAAAACCTGTTTAGTAATTTGATCAGTCACCCAAAATTTATTTCTGACACCAAATCAGCCATATCTGATGCATATAATCATACCGATTCGGAATATCTGAAATCAGAAAACAATCATCACAAAGATGCAGGATCTACTGCGTCTACTGCCATTCTAGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGAGATTCCAGGGCTGTTATATGCAGGGGTGGTAATGCATTTGCTGTTTCTCGAGATCATAAGCCAGACCAAACTGATGAGAGGCAAAGAATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGAACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGCGATAGACTCTTGAAGCAGTATGTTGTTGCTGATCCTGAAATCCAGGAAGAAAAAGTTGACAGTTCTCTTGAGTTTCTTATTCTGGCTAGTGATGGGCTATGGGACGTCGTCACAAACGAGGAAGCCGTTGCTATGATTAAACCACTTGAGGATGCAGAGGAGGCGGCAAAGAGGCTGATGCAAGAGGCATATCAGAGAGGTAGCGCTGACAATATCACTTGTGTTGTCGTTCGTTTCTTGATGAACCAAGGCTCTTCTTCTCATACTAGCTCCGTGTAA 882 0.4342 MGYLNSVLSSSSQVHAMDDAPVSGGGLSHNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGIRAAEYVKKNLFSNLISHPKFISDTKSAISDAYNHTDSEYLKSENNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAFAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVTNEEAVAMIKPLEDAEEAAKRLMQEAYQRGSADNITCVVVRFLMNQGSSSHTSSV* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0811 293 Gene3D - 26 285 IPR036457 -
Psa5g0811 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Psa5g0811 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Psa5g0811 293 PANTHER ALPHABET, ISOFORM E-RELATED 3 289 - -
Psa5g0811 293 SUPERFAMILY PP2C-like 29 280 IPR036457 -
Psa5g0811 293 CDD PP2Cc 33 280 IPR001932 -
Psa5g0811 293 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 289 - -
Psa5g0811 293 SMART PP2C_SIG_2 29 280 IPR001932 -
Psa5g0811 293 SMART PP2C_4 24 278 IPR001932 -
Psa5g0811 293 Pfam Protein phosphatase 2C 63 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0811 Psa-Chr5 65115550 65118239 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0811 1 293 PP2C-type Phosphatase Gene Family AT4G31750 87.713 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0811 K17506 - gmx:100795017 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0811 5 65115550 65118239 Psa5g0811 5 65115550 65118239 ECH