Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0809 ATGATTGCCAACAACAAAGCACTTGAATGGAAGAGTAGTCAGGAAATTATAAACGAAAGGGATGAACTTACCAAGCAGTTAGCAGTCTCAAAGGCTGATTGGAAACCCCAGGACTTGGCACTGAATCAAGTTGCATACGACGATTCAACCACGCCAGCACCAGTGTGCTCTTGCACCGGCATTCTCAGACAGTGCTACAAATGGGGTAATGGAGGTTGGCAATCTGCTTGTTGTACAACCACTTTATCGGTGTATCCTCTTCCAGCAGTGCCCAACAAAAGGCATACACGAGTAGGCAGTAGGAAAATGAGTGGAAGTGCTTTTAATAAGCTGCTTAGCCGGCTTGCAGCTGAAGGACATGATCTCTCACACCCAGTTGACCTTAAAGACCATTGGGCCAAGCATGGTACTGATCGATATATCATAATGAAGTAG 435 0.4575 MIANNKALEWKSSQEIINERDELTKQLAVSKADWKPQDLALNQVAYDDSTTPAPVCSCTGILRQCYKWGNGGWQSACCTTTLSVYPLPAVPNKRHTRVGSRKMSGSAFNKLLSRLAAEGHDLSHPVDLKDHWAKHGTDRYIIMK* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0809 144 PANTHER - 11 144 IPR010409 -
Psa5g0809 144 PANTHER PROTEIN BASIC PENTACYSTEINE6 11 144 - -
Psa5g0809 144 Pfam GAGA binding protein-like family 19 144 IPR010409 -
Psa5g0809 144 SMART GAGA_bind_2 1 144 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0809 Psa-Chr5 65039432 65040476 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0809 5 144 BBR or BPC Transcription factor family AT5G42520 71.127 6.29e-71 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Psa5g0809 GAGA_bind 1.1e-72 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0809 - - mtr:MTR_1g023660 278.87