Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0805 ATGGAGACAACAAAATCAATGTTTCTTTCCTTACTAGTTTCTTTTATTTTTATCTCTTGTTGTTATGTTTCATCTGTTAAGGCTGCTCTCTCTTTCGACTTTTATGCCGCTTCGTGTCCGAATGCTGAATTGATGATAAGAAATACAGTTAGTAGAGCTTCTTCTAATGATCCTTCCGTTCCGGGAAAGCTCCTTCGCTTGGTTTTCCATGATTGTTTCGTTGAGGGATGTGATGCATCTTTGATGCTACAAGGGAACAATACAGAACAAAGCGATCCAGCAAACAGGTCTGTGGGAGGATTTTCTGTTATAGAATCAGCGAAAAGACTTCTTGAGATCTTCTGCCCCGGAACCGTTTCTTGTGCAGACATAGTTGCTTTAGCAGCCAGAGATGCTGTCGAAATTGCCGGTGGACCAAGGATTCAGATTCCTACTGGTAGAAGAGATGGAATGGTTTCAATTGCTTCAAATGTTAGACCAAACATTATTGACACAAGTTTTACTATGGATGAGATGGTTAAACTCTTCTCGAATAAAGGATTGTCCTTACTCGATCTTGTCATTCTTTCAGGAGCTCATACAATAGGATCAGCTCATTGCAACACATTCAGGTCGCGGTTCCAACAAGACTCGAACGGAACTCTTAAGCTCGTAGACCAAACCATTGATACTAATTATGCAGACGAGCTAATGAGACAGTGTCCGGTAACTGCACAACCATCTGTGACAGTGAACAATGATCCTGAAACATCTATGCTATTTGACAACCAGTACTACAGAAATCTTTTAGCTCATAAAGTTCTGTTCCCGTCTGATTCGGTTTTGTTGAGCAACATTAACACGAAGAAAATGGTGGAGGATTTTGCAAATGATCAACAACTTTTCTATGTCAATTGGGGCGCTGCGTTCGTGAAGCTGACTAGTGTTGGCGTTAAGACTGACGAGGAGGGCGAAATTCGTCGTTCTTGTACAGCAACTAATGTATAA 987 0.4113 METTKSMFLSLLVSFIFISCCYVSSVKAALSFDFYAASCPNAELMIRNTVSRASSNDPSVPGKLLRLVFHDCFVEGCDASLMLQGNNTEQSDPANRSVGGFSVIESAKRLLEIFCPGTVSCADIVALAARDAVEIAGGPRIQIPTGRRDGMVSIASNVRPNIIDTSFTMDEMVKLFSNKGLSLLDLVILSGAHTIGSAHCNTFRSRFQQDSNGTLKLVDQTIDTNYADELMRQCPVTAQPSVTVNNDPETSMLFDNQYYRNLLAHKVLFPSDSVLLSNINTKKMVEDFANDQQLFYVNWGAAFVKLTSVGVKTDEEGEIRRSCTATNV* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0805 328 Gene3D - 33 327 - -
Psa5g0805 328 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Psa5g0805 328 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Psa5g0805 328 PANTHER PEROXIDASE 18-RELATED 15 326 - -
Psa5g0805 328 CDD secretory_peroxidase 30 326 IPR033905 GO:0004601|GO:0042744
Psa5g0805 328 PANTHER PEROXIDASE 25-RELATED 15 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 SUPERFAMILY Heme-dependent peroxidases 30 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 Pfam Peroxidase 47 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0805 328 Gene3D Peroxidase, domain 2 163 306 - -
Psa5g0805 328 ProSiteProfiles Plant heme peroxidase family profile. 29 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0805 Psa-Chr5 64961440 64963963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0805 10 327 Peroxidase AT4G31760 60.063 2.02e-146 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0805 K00430 K18328 gmx:102664900 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0805 5 64961440 64963963 Psa5g0805 5 64961440 64963963 ECH