Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0789 ATGTTCAATCTTGAGGAGCTTAGAGAAGCAACACATAGTTTCTCATGGAGTAATTTGTTAGGTGAAGGTGGTTTTGGACCGGTTTATAAGGGTTTTGTTGATGATAAACTCAGACATGGTTTGAAGGCTCAACCTGTTGCTGTCAAAAGATTGAACTTGGATGGCTCACAAGGTCACAGAGAGTGGTTGGCAGAGATTATATTTCTTGGACAGCTACGACATCCGCATCTTGTGAAGTTGATTGGATACTGTTGCGAGGAAGAGCAGAGGCTTTTGGTGTATGAATATATGGCAAGAGGAAGCTTGGAGAATCAATTATTCAGAAGATATTCTGCTACCTTACCATGGTCGACAAGAATGAAAATTGCATTAGGTGCGGCTAAGGGACTAGCTTTTCTTCATGAAGTGGATAAACCTGTAATATATAGAGATTTCAAAACATCGAATATATTACTGGATTCGGATTATACTGCTAAACTATCAGATCTTGGGTTAGCTAAAGATGGTCCTGAAGGAGAGGAAACACATGTGACAACAACATGTATAATGGGAACAAAAGGCTATGCTGCTCCTGAGTATATCATGTCAGGTCACCTTTCTACCAAGAGTGATGTGTATAGCTATGGAGTAGTGTTGTTGGAACTCCTGACAGGAAAGAGAGTGGTGGACAAAAACAGACCAAATAAAGAGAAACACCTTGTGGAATGGGCAAGGCCTATTTTGAGAGATCAAAGAAAGGTTCTTAATATCATAGACTCAAGATTAGAGGGACAGTTTTCTATTAAAGGAGCTTTGAAGGTTGCTGCATTGACATATAAATGCTTAAGCCACAACCCTACTCCAAGGCCTAATATGAGTGATGTGGTAAAGATATTGGAATCACTTCAAGACTTTGATGATGTGATCATAGGACCATTTGTGTATGTGGCTGTTAGTGAAAATGGCCAATGA 951 0.3975 MFNLEELREATHSFSWSNLLGEGGFGPVYKGFVDDKLRHGLKAQPVAVKRLNLDGSQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEQRLLVYEYMARGSLENQLFRRYSATLPWSTRMKIALGAAKGLAFLHEVDKPVIYRDFKTSNILLDSDYTAKLSDLGLAKDGPEGEETHVTTTCIMGTKGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGKRVVDKNRPNKEKHLVEWARPILRDQRKVLNIIDSRLEGQFSIKGALKVAALTYKCLSHNPTPRPNMSDVVKILESLQDFDDVIIGPFVYVAVSENGQ* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0789 316 Pfam Protein tyrosine and serine/threonine kinase 17 292 IPR001245 GO:0004672|GO:0006468
Psa5g0789 316 ProSiteProfiles Protein kinase domain profile. 14 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0789 316 SUPERFAMILY Protein kinase-like (PK-like) 3 294 IPR011009 -
Psa5g0789 316 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Psa5g0789 316 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL12-RELATED 1 314 - -
Psa5g0789 316 PANTHER OS01G0588500 PROTEIN-RELATED 1 314 - -
Psa5g0789 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Psa5g0789 316 Gene3D Transferase(Phosphotransferase) domain 1 97 302 - -
Psa5g0789 316 PIRSF ILK 31 300 - -
Psa5g0789 316 CDD STKc_IRAK 20 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0789 Psa-Chr5 63348596 63352288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0789 2 292 Glycoside Hydrolase AT3G07070 51.020 6.96e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa5g0789 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0789 - - gmx:100805771 561.607