Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0786 ATGGAGAAAGAGTGTGTTGAGGATATCATGGAAATTGAAGTCCTCCCTTCAATGTGGCCAGAAGATATTGCAACTGATGTTGGAAAACAGTTCAATATCGAAAAGCCAGGAAATGACCAAGTTATGTTACAAGAGATTACAATCATAGAAGAACCAACTATAGCCGATTTCAAGCGTCTCATTGAGCTAACAAATTTCACCGAAAAAGGCTCTTCTCAATTAGCAAACCTTATGAAACACTGGGAGTATAAACAAGCCCACGTCGCACGTCTTCTAAGAGAAGAACTCGACAACCTAAGCAAGCAAAGAAAGGATGTTGAGCTAAGGAAATTGGAGATACTGGAAGAGCATAGGTTCGAGGAAGAGAGATATGGAGGCGATAAACGGCCGGTTTCTATATTGGATGATATTTATGATATATGGCAACAGGATGTTCCTTGTAGGAAAAGCGATGTTGTGGTTCAAAACAAGAGAATTGAAATTGATGCTGAGTATGATACTGTTGTGTACTGGAAACAGCGAGCCGCGCACTTGGAAAAGCTTCTTGAGGCAAGTATGATGAGAGAAGAGTCTCTTGAGGAAAAGTTGCAAGAAAGTATTAAGAACTTTGAGAGACAATCCTCACCTGTTGAAGAACTCTCTCAGATTTTGAAGAGAGCAGATAATTTCCTGCATTTTATACTCCAAAATGCTCCGGTTGTTATTGGCCATCAGGACAAAGAGTTGCGATATCGCTTTATCTATAATCACTTTCCAAGTTTACAAGAGGAGGACATTATAGGAAAAACAGACGTTGAAATATTCACCGGATCTGGTGTTAGGGAGTCTCAAGATTTTAAGATGGAAGTTTTAGAAAAAGGATTGCCTGCGAAAAGGGAAATCACTTTCGAGACAGAACTATTTGGTTCAAAGACATTCTTGATTTACGTCGAACCTGTCTTCAGCAAGACAGGAGAAACAATTGGAATCAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAAAGGATGGCGAAGATTCGCGAAGAGATAGCTGTTCAAAAAGCAAAGGAAACAGAACTGAATAAAACCATTCACATTACAGAGGAAACAATGAGAGCAAAACAAGTGCTAGCAACAATGTCGCATGAGATAAGATCTCCACTATCCGGTGTTGTTAGCATGGCTGAAATTCTTTCCACCACTAAACTTGATAGGGAGCAAAGACAGCTCTTGGATGTCATGTTATCGTCTGGAGACTTGGTTCTTCAACTTATAAATGACATACTTGATCTTTCCAAGGTTGAGTCAGGAGTGATGAAGTTAGAGGCTACAAAGTTTCGACCACGAGAGGTAGTAAAGCATGTGCTTCAGACAGCTGCAGCATCATTGCAGAAAATATTAACCTTAGAAGGACATGTAGCAGATGATGTACCTATCGAGGTTACTGGCGATGTTTTAAGGATTCGACAAATCCTCACCAATTTAATCAGCAATGCCATCAAGTTTACACATGAAGGCAAAGTTGGGATAAACCTTTATGTAATGAAAGAAGAAAAACATCTCTCAACACCTCAAAACCATGGATTTAATGATGATTGTAGATCTCCGGTTAAAAGCGAATGCTCGATGAATGGAGACACAGAGGATCAACGTCTCTCAGCTGAAACAACCGTGTGGATAGGTTGTGATGTATATGATACAGGCATTGGAATACCAGAAAATGCAAAACATAGTTTATTTAAAAGGTACATGCAAGTAAGTGTAGACCACGCTCGAAAGTACGGCGGCACGGGGCTAGGACTAGCGATATGCAAACAATTGGTTGAGTTGATGGGAGGTAGTCTAACAGTGTCAAGCAAAGAACAGCATGGTTCTACCTTCACATTCATACTTCCATACAAGGTCTCAATAGCTTGTGATAGTTCTGATTACTCGGACGAGCTCTCGGACATGGAGCATAACGATGCAGCTTCTGATGACACCACAACAGAAGGTTTCTTCCAGTTCCACACAAACAGAACTCACAAGCTATTACCACACAAATTCAGTGGATTTTCTGAGAGTTCATTCTCATTTCCCGCTACTTCTAGTGACATCGGGTTGAAAGGGACATGTTCTTTCAATGATTCGTCTTCAGTAGTTGATGCTTCAGATACGTCTGAATCAGCTAGTTCATCTAGTAATAAACATCATCTATATAATTCTCATGCATGGTTTCAAAATGGCAGTGCAGATTCTTCTCAGCATATGGTGGTAAACACGACTACTCAATGTGTTAGTAGAAGTAGTAAATCAGAAGTAACCAAATCCATATTGAAGCCTAAGGTCCTTCTTGTGGAAGATAACAAGATCAACATCATGGTGACACAATCTATGATGAAGCAGTTGGGTCATAACATTGATGTTGTCACTAATGGAGCCGAAGCCGTGCGAGCCTTTCAACGCTGTACTTATGACTTGGTTCTGATGGACGTGTGCATGCCGGTTATGGATGGTCTTCAAGCAACAAAACTGATTCGGTCTTTCGAGGAAACAGGCAATTGGGATGCTGCAAAAAATGCTGGAATCAAGCAAAGTCTACTAGATCGAGATTATGAAAGTTCTGTTCCATCTACAAAGCGAACTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCAGAAGAGTGTTTTGCTAATGGTATGGACTCATTTGTATCAAAACCAGTGAGTTTACAAAAATTGAAAGAGTGTATTGAACAATATACTTAA 2748 0.4021 MEKECVEDIMEIEVLPSMWPEDIATDVGKQFNIEKPGNDQVMLQEITIIEEPTIADFKRLIELTNFTEKGSSQLANLMKHWEYKQAHVARLLREELDNLSKQRKDVELRKLEILEEHRFEEERYGGDKRPVSILDDIYDIWQQDVPCRKSDVVVQNKRIEIDAEYDTVVYWKQRAAHLEKLLEASMMREESLEEKLQESIKNFERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKELRYRFIYNHFPSLQEEDIIGKTDVEIFTGSGVRESQDFKMEVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKTGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKETELNKTIHITEETMRAKQVLATMSHEIRSPLSGVVSMAEILSTTKLDREQRQLLDVMLSSGDLVLQLINDILDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPIEVTGDVLRIRQILTNLISNAIKFTHEGKVGINLYVMKEEKHLSTPQNHGFNDDCRSPVKSECSMNGDTEDQRLSAETTVWIGCDVYDTGIGIPENAKHSLFKRYMQVSVDHARKYGGTGLGLAICKQLVELMGGSLTVSSKEQHGSTFTFILPYKVSIACDSSDYSDELSDMEHNDAASDDTTTEGFFQFHTNRTHKLLPHKFSGFSESSFSFPATSSDIGLKGTCSFNDSSSVVDASDTSESASSSSNKHHLYNSHAWFQNGSADSSQHMVVNTTTQCVSRSSKSEVTKSILKPKVLLVEDNKINIMVTQSMMKQLGHNIDVVTNGAEAVRAFQRCTYDLVLMDVCMPVMDGLQATKLIRSFEETGNWDAAKNAGIKQSLLDRDYESSVPSTKRTPIVAMTANALSESAEECFANGMDSFVSKPVSLQKLKECIEQYT* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0786 915 Pfam His Kinase A (phospho-acceptor) domain 372 434 IPR003661 GO:0000155|GO:0007165
Psa5g0786 915 Coils Coil 904 915 - -
Psa5g0786 915 CDD HATPase_EvgS-ArcB-TorS-like 485 629 - -
Psa5g0786 915 Gene3D PAS domain 211 346 - -
Psa5g0786 915 Gene3D - 435 635 IPR036890 -
Psa5g0786 915 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 367 434 IPR036097 GO:0000155|GO:0007165
Psa5g0786 915 PRINTS Bacterial sensor protein C-terminal signature 557 571 IPR004358 GO:0016310|GO:0016772
Psa5g0786 915 PRINTS Bacterial sensor protein C-terminal signature 592 610 IPR004358 GO:0016310|GO:0016772
Psa5g0786 915 PRINTS Bacterial sensor protein C-terminal signature 616 629 IPR004358 GO:0016310|GO:0016772
Psa5g0786 915 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 541 914 - -
Psa5g0786 915 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 1 514 - -
Psa5g0786 915 Pfam Response regulator receiver domain 773 840 IPR001789 GO:0000160
Psa5g0786 915 Gene3D - 356 434 - -
Psa5g0786 915 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 423 630 IPR036890 -
Psa5g0786 915 SMART HisKA_10 369 434 IPR003661 GO:0000155|GO:0007165
Psa5g0786 915 ProSiteProfiles Histidine kinase domain profile. 376 632 IPR005467 -
Psa5g0786 915 ProSiteProfiles Response regulatory domain profile. 772 915 IPR001789 GO:0000160
Psa5g0786 915 CDD REC_hyHK_CKI1_RcsC-like 773 911 - -
Psa5g0786 915 SUPERFAMILY CheY-like 771 914 IPR011006 -
Psa5g0786 915 SMART REC_2 771 911 IPR001789 GO:0000160
Psa5g0786 915 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 480 630 IPR003594 -
Psa5g0786 915 CDD HisKA 368 430 IPR003661 GO:0000155|GO:0007165
Psa5g0786 915 Gene3D - 767 915 - -
Psa5g0786 915 SMART HKATPase_4 480 632 IPR003594 -
Psa5g0786 915 Coils Coil 175 206 - -
Psa5g0786 915 Coils Coil 89 116 - -
Psa5g0786 915 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 541 914 - -
Psa5g0786 915 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 1 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0786 Psa-Chr5 63131426 63135648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0786 1 914 Histidine Kinase Gene Family AT5G10720 59.365 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Psa5g0786 HATPase_c 5.5e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0786 - - gmx:100811117 1380.54