Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0785 ATGGTGGTGAAGTTCATGGTTACATGTTGGTGTCTAGGTCTTTTGTTGGGTGGAATGGCACAAACTAGAAACGAGAGTAGTGTAGTGAAAGTTGGAGCTGTGCTTGATATTAGCGATGGAACAGTTGGAAAGATAGGTTTGAGCTGCATCAACATGGCCCTCTCAGATTTCTATCTCTCTCATTCTCACTACAAAACTAGAATCCAAATCATCGTCAGGGATTCTCACAGGGACGTTGTTAATGCAGCTGCACACGCTTTGGATCTTATAAAAAATGAGAAAGTAGAAGCAATCATGGGACCAACAACAACAATGGAAGCAGATTTTGTGATTCAACTCGGAGACAAAGCTCACGTGCCCATTGTAGCATTTTCTGCAATAAGCCCTTCACTTGCATCACTTCAAAGTTCATATTTTTTCCAAATATCACAGACTGATTCAGCTCAACTGAAAGCCATCACCACAATTATTCAAGCTTTTGGTTGGAAACAAGTGGTCCCTATTTATGTTGACAATAGTTTTCGTGAAGGACTCATTCCCTATTTAACCAATGTTCTTCAACAACAGAATATTCAAGTTCCTTATCTTAGTGCAATTTCTCTTTCAGCCACAGATGATGCCATTACTCAAGAGCTTTACAAAATAATGACTACTATACCAACTAGAGTATTTGTTGTGCACATGTCACCAACTCTTGGCTCTAAACTTTTTACCATAGCTAAAAAAATTGGGATGATGGGTCAAAGCTATGTTTGGATAGTAACTGATAGTATGGCTAATTTATTCAATCCATTGGATTTAGATGTCTGGGAATCAATGGAAGGAGTAGTTGGTGTTAGGACTTATATTCCAAGAACAAAAAAGCTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTCATGACTGATAATCCAACTCTTGTTGACACAAATTTGAACATTTTTGGAATATGGGCTTATGATGCAACAATTGCATTAGCAATGGCTGTTGAGAAAGTTGGTTACAATGAGAGCAACAACACATCAAGCAATTATTACTTACCTGAATTGGAAAGGCTTGGGATTGCAGAAAATGGTGAGAAATTGAGGGAAGCTTTGTCAAACACTAGATTTAGTGGTCTTAGCGGTGATTTTAATGTTTCTGATGGGAAGTTACAAGCATCAACATATGAGATAATTAATGTGATTGGTAATGGTGAAAAGAGGGTTGGATTTTGGACACCAAACAAGGGTTTGGCTAGAAATTTGGATACAGAAGACAGAAACAATAATAGTACATATTCTAGTTCTAAAAATGATCTTGGAACTGTCGTATGGCCAGGGGAGATGAACTATATTCCAAAGGGATGGGAAATTCCATCTATAAATGGGAAGAAATTAAGGGTAGGAGTTCCTGTAAAAAATGGAAATAACTACACTCAGTTTTTGAAAGTAATCCAGGATCCTAGTGACAATTCAACAAATGCCACTGGCTTCAGCATTGATGTCTTCAAAGCCGTGGTGGAAGCGTTGCCTTATGGCTTTCCGCAATACGAATTTGTTGCATTTGAAAAGCCTAATGGGGAGATGGCAGGAACATACGACGACTTAATCTTTGAACTCTATCACGGGAAGTATGATGCGGTAGTGGGGGATATAACCATCATTGCAGACAGATCCAACTATGTTGATTTCACAATGCCATACACAGAATCTGGTGTGACAATGATTGTTTCGATGAAAGACAGCAGGAAGAAAAATGCATGGGCCTTTTTGACGCCATTGACAAGGCAACTTTGGGCAACAACAGCTTGTTCATTTGTGTTCATTGGATTCGTTGTTTGGGTTCTTGAACATAGAATAAACAGCGATTTTAGGGGACCGCCCTCTCATCAAATCGGCACAAGCTTATGGTTTTCCTTCTCGACTATGGTTTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGGGTAGATTTGTGGTGGTTGTATGGGTTTTTGTGGTTCTAATTGTGGTTCAAAGTTACACTGCAAGTTTGACTTCACTCTTAACAGTTAACCAATTAAGTCCAACTATTACAGATGTTAACCAACTTCGAAAGAACAAGATGAATGTTGGCTATCTCAAAGGTTCTTTTGTTAATGGAATCTTGAAGAACTTAAAATTTCAAGATTCTCAGCTCATTGCTTATCAATCAGCTGAAGAATGTCATGAGCTTTTCATGAAAGGAAGTGCAAAAGGTGGCATTGATGCTGCTTTTGATGAAGTTCCTTATGTTAAGCGCTTTCTTGAAATTTATAGTTGTTCAAAGTATGTCATGGTTGAACCAACGTTTAAAACGGGCGGTTTCGGCTATGCATTCCCAAAAGGTTCACCTCTTGTTGCAGACATTTCAAGGGCAATCCTTAGTGTGACACAAGGAGACAAAATGAAAACAATTGAGAATGCATGGTTCAAAGAAAGTAGCTGTCAAGATTCTAATACAAAATTCTCATCTGATAACAATCTTGGACTTGAAAGCTTTTGGGGTCTATTTCTCATTGCATGGATTGCTTCCCTATCAGCACTCCTAATATTTTTTGTTACATTCCTATATCAGCACAAACATATTTGGTTAAACAGTGATCCAAATGCTTCAATATGGCAACGAATTCGAGTCTTGGTAAGGATATTTGATCAAAGAGACTTGAACTGTCACAACACATTCAAGAAAAGTGAAATTAAAACCGAAAGGATTGTTAGTCCTCGTGATGACGATTTAGGTTCAGTTGAGGCTTTTCCAGGTACACATTGTCCTCCTAGTCCATCTAGCCAAACTGAGTCAAGTGTTTCGGTTTACGGCGATTTTAGTGCCGACCATGGTAGTGCTAATCTACATAGCTGTGCAGCATATGGTGAAAACACAGAAATGGAGGTTGTACAAAATACTAATCCGGAAGTTGAACCTGTGAACAACATGACAGAATCTGTAAGTGTAACATCAAGCTCCTAA 2970 0.3842 MVVKFMVTCWCLGLLLGGMAQTRNESSVVKVGAVLDISDGTVGKIGLSCINMALSDFYLSHSHYKTRIQIIVRDSHRDVVNAAAHALDLIKNEKVEAIMGPTTTMEADFVIQLGDKAHVPIVAFSAISPSLASLQSSYFFQISQTDSAQLKAITTIIQAFGWKQVVPIYVDNSFREGLIPYLTNVLQQQNIQVPYLSAISLSATDDAITQELYKIMTTIPTRVFVVHMSPTLGSKLFTIAKKIGMMGQSYVWIVTDSMANLFNPLDLDVWESMEGVVGVRTYIPRTKKLDDFRVRWKRKFMTDNPTLVDTNLNIFGIWAYDATIALAMAVEKVGYNESNNTSSNYYLPELERLGIAENGEKLREALSNTRFSGLSGDFNVSDGKLQASTYEIINVIGNGEKRVGFWTPNKGLARNLDTEDRNNNSTYSSSKNDLGTVVWPGEMNYIPKGWEIPSINGKKLRVGVPVKNGNNYTQFLKVIQDPSDNSTNATGFSIDVFKAVVEALPYGFPQYEFVAFEKPNGEMAGTYDDLIFELYHGKYDAVVGDITIIADRSNYVDFTMPYTESGVTMIVSMKDSRKKNAWAFLTPLTRQLWATTACSFVFIGFVVWVLEHRINSDFRGPPSHQIGTSLWFSFSTMVYAHREKVVSNLGRFVVVVWVFVVLIVVQSYTASLTSLLTVNQLSPTITDVNQLRKNKMNVGYLKGSFVNGILKNLKFQDSQLIAYQSAEECHELFMKGSAKGGIDAAFDEVPYVKRFLEIYSCSKYVMVEPTFKTGGFGYAFPKGSPLVADISRAILSVTQGDKMKTIENAWFKESSCQDSNTKFSSDNNLGLESFWGLFLIAWIASLSALLIFFVTFLYQHKHIWLNSDPNASIWQRIRVLVRIFDQRDLNCHNTFKKSEIKTERIVSPRDDDLGSVEAFPGTHCPPSPSSQTESSVSVYGDFSADHGSANLHSCAAYGENTEMEVVQNTNPEVEPVNNMTESVSVTSSS* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0785 989 Pfam Receptor family ligand binding region 49 397 IPR001828 -
Psa5g0785 989 Gene3D - 730 818 - -
Psa5g0785 989 Pfam Ligand-gated ion channel 813 844 IPR001320 GO:0015276|GO:0016020
Psa5g0785 989 Gene3D - 459 580 - -
Psa5g0785 989 CDD GluR_Plant 458 811 - -
Psa5g0785 989 Gene3D - 147 311 - -
Psa5g0785 989 Gene3D - 356 458 - -
Psa5g0785 989 PIRSF IGluLR_plant 1 937 IPR017103 -
Psa5g0785 989 CDD PBP1_GABAb_receptor_plant 30 416 IPR044440 -
Psa5g0785 989 SUPERFAMILY Periplasmic binding protein-like I 27 441 IPR028082 -
Psa5g0785 989 SUPERFAMILY Periplasmic binding protein-like II 439 814 - -
Psa5g0785 989 SMART GluR_14 459 813 IPR001320 GO:0015276|GO:0016020
Psa5g0785 989 Gene3D - 581 720 - -
Psa5g0785 989 PANTHER GLUTAMATE RECEPTOR 2.9 29 904 - -
Psa5g0785 989 Pfam Bacterial extracellular solute-binding proteins, family 3 484 812 IPR001638 -
Psa5g0785 989 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 29 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0785 Psa-Chr5 63095828 63118549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0785 11 925 Ion Channels AT2G29110 51.075 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0785 K05387 - tcc:18587654 1060.44