Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0781 ATGGGGGTATATCTCAGTACTCCCAAAACTGAGAAATTTTCTGAAGATGGAGAAAGTCACAATCTTAGATATGGTTTATCGTCCATGCAAGGCTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGGTTCTACTTCGTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTTTCTTCATCAACAGATGCTCAAAAGTGAAGCATACTTAGTTGGAGATATTGGGACTTCTCTTCAAGAATCATTTTTAAGAATGGATGAGATGATGCGTGCAATGGTATTAGCAGAGCTGATGATTGGGCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACAGCGTGTGTTGCAGTTATCAGAAACACCAGCTTCTGTTGGAAATGCTGGTGATTCACGTTGTGTGATATTTCGAAAGGGACAGGCATACAATTTGTCCAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATTTCGAAAGCTGGTGGTTTTATTCATGCAGGAAGAGTAATGGCAGTTTTACCTTACAAGAGCTATGGTGACATGGAATTTAAACAGAACAAATTTCTTCCTGCTGAAAAACAAGTTGTAACTGCCAATCCAGATATAAACACCGTTGAGCTTTGTGATGAAGATGAATTTATGGTTCTAGCTTGTGATGGCATATGGGACTGCTTGTCAAGTCAACAATTGGTAGATTTTGTTCATGAACAATTGTGTTCGGAAACAAAACTTTCCACTGTGTGCGAAAGAGTATTTGACCGGTGTTTGGCTCCATCAACTGCTGGTGGCGAAGGATGTGATAACATGACCATGATCTTGGTTCAGTTCAAAAAACCTGCTCAGTCCAGTGCACCAGCAGAAGAGCAATCTTCATCAAACGAACTAGCTGATTCACAAGTTGAACTGAAGCTTGAAAGAAGTGATGTTTAG 990 0.4101 MGVYLSTPKTEKFSEDGESHNLRYGLSSMQGWRATMEDAHAAYTDLDGSTSFFGVYDGHGGKVVAKFCAKFLHQQMLKSEAYLVGDIGTSLQESFLRMDEMMRAMVLAELMIGLLRRGLILILLDQLQEAQRVLQLSETPASVGNAGDSRCVIFRKGQAYNLSRDHKPDLEIEKERISKAGGFIHAGRVMAVLPYKSYGDMEFKQNKFLPAEKQVVTANPDINTVELCDEDEFMVLACDGIWDCLSSQQLVDFVHEQLCSETKLSTVCERVFDRCLAPSTAGGEGCDNMTMILVQFKKPAQSSAPAEEQSSSNELADSQVELKLERSDV* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0781 329 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 143 308 - -
Psa5g0781 329 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 105 - -
Psa5g0781 329 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Psa5g0781 329 ProSiteProfiles PPM-type phosphatase domain profile. 23 296 IPR001932 -
Psa5g0781 329 Gene3D - 1 297 IPR036457 -
Psa5g0781 329 MobiDBLite consensus disorder prediction 300 329 - -
Psa5g0781 329 SUPERFAMILY PP2C-like 3 298 IPR036457 -
Psa5g0781 329 SMART PP2C_4 13 294 IPR001932 -
Psa5g0781 329 CDD PP2Cc 23 296 IPR001932 -
Psa5g0781 329 PANTHER PROTEIN PHOSPHATASE 2C 1 105 IPR015655 GO:0004722|GO:0006470
Psa5g0781 329 PANTHER PROTEIN PHOSPHATASE 2C 143 308 IPR015655 GO:0004722|GO:0006470
Psa5g0781 329 MobiDBLite consensus disorder prediction 302 318 - -
Psa5g0781 329 Pfam Protein phosphatase 2C 23 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0781 Psa-Chr5 62988504 62992464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0781 1 308 PP2C-type Phosphatase Gene Family AT2G25070 61.584 1.20e-148 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0781 K17499 - gmx:100787778 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0781 5 62988504 62992464 Psa5g0781 5 62988504 62992464 ECH