Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0778 ATGGCTGCTTCCTCAAGAACTGTTTCTGCTTCTCTACTCTTCATGTTCTTTCTCTTTGGCTTCTCTGCAGCTAAAGAACTCTTGGTTGGAGGCAATGTAAACGCATGGAAGATTCCATCTTCTGAAGCAGATTCACTCAATAATTGGGCTGAGAAGTCTCGTTTCAATGTCGGCGATCATCTTGTATGGAAATATGATGGTGGGAAAGACTCAGTTTTGCAAGTGAACAGACAAGATTATGCTAACTGCAACAGCTCAAACCCTATTGAAAAGTACAGTGATGGGAACACTAAGGTGAAGCTAGACCGTCCTGGACCATTCTACTTCATCAGTGGAGCAAAGGGTCATTGTGAGAAGGGACAAAAGCTAGTTGTGGTGGTTATTACTCCAAGGAGAAGATACAGTGCAGTTTCCCCTGCACCTTCTCCAGCACCTTCTTCAGCAGAGTTAGAAGAAAGTCCAGCTGTTGCTCCAACTAGCAGTGCACCAGTTCTGCAAACTGGTTTTGCGACTGCTCTGGGACTATTAGCTACTATTTCTGTTGCTTTTCTCATGTGA 558 0.4427 MAASSRTVSASLLFMFFLFGFSAAKELLVGGNVNAWKIPSSEADSLNNWAEKSRFNVGDHLVWKYDGGKDSVLQVNRQDYANCNSSNPIEKYSDGNTKVKLDRPGPFYFISGAKGHCEKGQKLVVVVITPRRRYSAVSPAPSPAPSSAELEESPAVAPTSSAPVLQTGFATALGLLATISVAFLM* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0778 185 PANTHER EARLY NODULIN-LIKE PROTEIN 3 8 175 - -
Psa5g0778 185 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Psa5g0778 185 Gene3D - 23 131 IPR008972 -
Psa5g0778 185 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Psa5g0778 185 PANTHER BLUE COPPER PROTEIN 8 175 IPR039391 GO:0009055
Psa5g0778 185 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Psa5g0778 185 CDD OsENODL1_like 25 128 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0778 Psa-Chr5 62972049 62972704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0778 1 176 Phytocyanin Superfamily AT4G31840 53.409 4.50e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0778 - - gmx:100305551 230.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0778 5 62972049 62972704 Psa5g0778 5 62972049 62972704 ECH