Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0761 ATGGAACCAACGTGCGTCGATACTTCTCTCAACCTCAACCTTGCCCCTTCTCAAGAAACAGACGTTGCTATGGTTGCTAAGGTTCTGGTTGAAGAGTTGGAGCGTCTAAGTAATGAAAATAAGAAGTTAACTGAGAGGTTAAACCTCATGTGCGACAATTATATTGCTTTGCAAAACCATTTAAACGAGTTCAAGAGTCAAGAAACAGTGATCACGCCATCGAGGAAGAGAAAGATTGATTGCATTGAAAATTGCACCACTACTTCTAAGGAAGAAACATTCAAACATAACTCTTGTCCGAAAATTTCTAAGGTTCTTGTTCGCACAGATGCATCCAACACCAGCTTATATGTGAGAGATGGATATCAATGGAGAAAATATGGTCAGAAAGTTACTAGAGATAATCCATCTCCTAGGGCTTACTTCAAGTGCTCTTTTGCTCCTTGTTGTCCTGTGAAGAAGAAGGTGCAGAGAAGTGTAGAAGACCCAAACGTGTTAGTGACAACATACGAAGGAGAGCACAACCATGCACATCACCAAGCACAAACATCACCGTCAAACCAAAGTGAAACCTCTACGCATAATTTTGTTCCTTCTCCACTAGCTTCAACGCATGACTGGGTCGTGCCGAGAAAGTTAGTGGTTGACAATGGTGCTCAAAGGTCGTCTATACACCAGTTGTTAGTTCAGCAATTGACAACTTCTTTGACAAGAGATCCTAATTTCACAACAGCACTTGCTACGGCAATTTCTGGAACAATTTTGGATGGATGGGAAAAACGGTGA 786 0.416 MEPTCVDTSLNLNLAPSQETDVAMVAKVLVEELERLSNENKKLTERLNLMCDNYIALQNHLNEFKSQETVITPSRKRKIDCIENCTTTSKEETFKHNSCPKISKVLVRTDASNTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPCCPVKKKVQRSVEDPNVLVTTYEGEHNHAHHQAQTSPSNQSETSTHNFVPSPLASTHDWVVPRKLVVDNGAQRSSIHQLLVQQLTTSLTRDPNFTTALATAISGTILDGWEKR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0761 261 Gene3D WRKY domain 101 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g0761 261 MobiDBLite consensus disorder prediction 174 195 - -
Psa5g0761 261 ProSiteProfiles WRKY domain profile. 113 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g0761 261 Coils Coil 26 53 - -
Psa5g0761 261 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 255 IPR044810 GO:0003700
Psa5g0761 261 MobiDBLite consensus disorder prediction 179 195 - -
Psa5g0761 261 Pfam WRKY DNA -binding domain 120 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa5g0761 261 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 255 - -
Psa5g0761 261 SUPERFAMILY WRKY DNA-binding domain 115 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa5g0761 261 SMART WRKY_cls 118 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0761 Psa-Chr5 62359062 62360251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0761 4 254 WRKY Transcription Factor Family AT1G80840 42.759 2.60e-64 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa5g0761 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0761 - - gmx:100127373 294.664