Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0746 ATGGCCAAATGTCACCGGAGCAACGTTGATTCAATAGCTCTCAATCAACGCCACCATGCCAAAAACACCACCGCCGACAACTTCTGCATCTCCGCCTCGTCGATCCGCCGCATCATTTTCGACGCCGTGAGCTGCGGCGGAACTTCTCGCCACCGACATCGCCAACGCGAGGAACTCCACAGCGACATTAGCTCTTCTTCTTCGGCGGCAAGTTTTGCATCCGTTACCGTTAGCCACAAAGAAAAGAAGCATGTTCAAGAAGAGAACCACAAAGAAAAGAAGCATGTTCAAGAAGAGAAGCATGAGAAGCTACTGGATCTCCTGAACGTACCGGTGCATGTAACGGATGCGGAATCGAAGAAGAAGGAAGAAATGTTGTTAGAGCTGAAGCAAGTGGTGAAAGAATTGCGCGATGAGGACTCGACGAAGCGGAGAATGGCGGCGGCGAGAGTAAGGTTACTGACGAAAGATGATACCGAAGCGAGAGGCTCACTCGCTATGCTCGGAGCAATTTCTCCACTCGTTGGAATGCTTGATTCAGAAGACCTTCATTCTCAGATCGATTCTCTTTATGCATTACTCAATATCGGAATCGGCAACGATGCAAATAAAGCAGCGATTGTAAAAGTTGGTGCTGTTCATAAGATGCTGAAGCTAATTGAATCACCCGGTGTTGTTGATTCATCAGTTTCTGAGGCGATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGATTCTAACAAACCAATAATTGGATCCTCTGGTGCAATACCTTTTTTAGTTAGAACCCTTCAGAATCTAGATAAAAGTAGTAAAACTAGTTCCCAAGTTAAGCAAGATGCTCTTCGAGCTCTTTACAATCTTTCGATCAATCAGACCAACATTTCGTTCGTTTTGGAAACCGATTTGGTATTGTTTATGATAAACTCAATTGAAGATATGGAAGTGAGTGAGAGAATCCTTTCAATTCTAAGCAATTTGGTGTCAACTCCAGAAGGTAGAAAAGCTATCAGTGCTGTTAGGGATGGAATAGCAATTTTGGTTGATGTATTGAGCTGGACAGATTCGCCTAAATGCCAAGAGAAAGCTTCATACATTTTGATGATCATGGCACACAAAGCCTATGCTGATAGGCAAACCATGATTGAGGCCGGGATTGTGTCGGCTTTGCTCGAGTTGACGCTTGTAGGTACTGCATTGGCGCAGAAAAGGGCATCAAGGATATTGGAATGTTTTAGGGTAGACAAAGGGAAGCAGGTTTCTGGGAGATGTGATGGTGGAAACTTAAGTTTAACTGTCTCTGCACCTATTTGTGCCTCGTCGTCTTCGACGGATGGAGGAGGTAAAGAGTATTTAATGGAGGAGGTGAACATGATGAGCGATGAAAAGAAAGCAGTGAAGCAATTAGTTCAGCAGAGTTTGCAGAACAACATGATGAAAATAGTCAAGAGGGCTAACTTGCGTCACGATTTCGTTCCTTCTGAGCATTTTGCTTCACTCACTTCGAGTTCGACGTCAAAGAGCCTTCCATTTTGA 1536 0.4447 MAKCHRSNVDSIALNQRHHAKNTTADNFCISASSIRRIIFDAVSCGGTSRHRHRQREELHSDISSSSSAASFASVTVSHKEKKHVQEENHKEKKHVQEEKHEKLLDLLNVPVHVTDAESKKKEEMLLELKQVVKELRDEDSTKRRMAAARVRLLTKDDTEARGSLAMLGAISPLVGMLDSEDLHSQIDSLYALLNIGIGNDANKAAIVKVGAVHKMLKLIESPGVVDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLQNLDKSSKTSSQVKQDALRALYNLSINQTNISFVLETDLVLFMINSIEDMEVSERILSILSNLVSTPEGRKAISAVRDGIAILVDVLSWTDSPKCQEKASYILMIMAHKAYADRQTMIEAGIVSALLELTLVGTALAQKRASRILECFRVDKGKQVSGRCDGGNLSLTVSAPICASSSSTDGGGKEYLMEEVNMMSDEKKAVKQLVQQSLQNNMMKIVKRANLRHDFVPSEHFASLTSSSTSKSLPF* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0746 511 Gene3D - 273 423 IPR011989 -
Psa5g0746 511 SUPERFAMILY ARM repeat 128 413 IPR016024 -
Psa5g0746 511 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 511 - -
Psa5g0746 511 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 511 - -
Psa5g0746 511 MobiDBLite consensus disorder prediction 77 98 - -
Psa5g0746 511 SMART arm_5 200 243 IPR000225 GO:0005515
Psa5g0746 511 SMART arm_5 333 372 IPR000225 GO:0005515
Psa5g0746 511 SMART arm_5 158 198 IPR000225 GO:0005515
Psa5g0746 511 SMART arm_5 291 329 IPR000225 GO:0005515
Psa5g0746 511 SMART arm_5 244 290 IPR000225 GO:0005515
Psa5g0746 511 MobiDBLite consensus disorder prediction 49 98 - -
Psa5g0746 511 Gene3D - 85 272 IPR011989 -
Psa5g0746 511 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 255 294 IPR000225 GO:0005515
Psa5g0746 511 Coils Coil 119 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0746 Psa-Chr5 61377377 61379156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0746 124 413 U-box Gene Family AT2G23140 32.646 5.50e-32 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0746 - - gmx:100796229 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa6g0622 6 21115577 21118922 Psa5g0746 5 61377377 61379156 PCT