Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0721 ATGAAAGCACTGGATAGCAGCCACGCAGCGGCGGAGGGATTAATGAACTGGCAGAAAGCGAAATACAAAGGGGAAATAATGGCGCATCCGTTGTACGAACAACTTCTATCAGCACACGTGGCGTGTTTGAGAATCGCCACACCGGTTGACCAGTTGCCGAGGATCGATGCTCAGCTGGCTGAGTCGCAGAATGTTGTTGCCAAGTACTCTGCCTTTGTACAAGGCATGCTTGATGATGATAATAAACAACTCGATCACTTCATGTCACACTATGTTTTGTTGCTTTGTTCATTCAAAGAACAGCTCCAGCAACATGTCCGGGTCCATGCCATGGAAGCAGTAATGGCTTGTTGGGAGATTGAGCAATCCTTGCAAAGTCTAACAGTTTTTACCACATGTTTGACAGGAGTTTCACCCGGGGAAGGTACAGGAGCAACAATGTCTGAAGATGAAGATGAACAAGTGGATAGTGATACTAATCTGTTTGATGGAAATTTGGATGGTTCAGATAATAATATGGGAGGATTTGGTCCTCTTGTTCTAACAGAGAATGAGAGGTCCTTAATGGAACGTGTAAGACATGAATTAAAGCATGAGTTGAAACAGGTACAAAACTAA 618 0.4401 MKALDSSHAAAEGLMNWQKAKYKGEIMAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAESQNVVAKYSAFVQGMLDDDNKQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTVFTTCLTGVSPGEGTGATMSEDEDEQVDSDTNLFDGNLDGSDNNMGGFGPLVLTENERSLMERVRHELKHELKQVQN* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0721 205 Coils Coil 186 205 - -
Psa5g0721 205 SMART KNOX2_2 73 129 IPR005541 GO:0003677|GO:0005634
Psa5g0721 205 Pfam KNOX1 domain 22 63 IPR005540 GO:0003677|GO:0005634
Psa5g0721 205 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 7 202 - -
Psa5g0721 205 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 202 - -
Psa5g0721 205 Pfam KNOX2 domain 80 128 IPR005541 GO:0003677|GO:0005634
Psa5g0721 205 SMART KNOX1_2 20 64 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0721 Psa-Chr5 57336315 57338841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0721 17 202 Homeobox Transcription Factor Family AT5G11060 79.255 1.07e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0721 - - gmx:100810257 306.219