Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0704 ATGGCGACTCATCTGCTAAGCTTTTCCCTCTCCTCCCCAGCTAACCTCTCTCTCAATCTCAATCACCATCGCCACTTCATTTCTCTTCTACCCTCAAAACTACGTCGCTCCCGCCACCTCAACCGCCGACAAATTTCCCGCCCATATTTCTCCGTCTCGAACTCTATCAGCACTGAAATTCGCTCATCGGAATCGCCTCTTCTTCAACGCCAGCCGCAAATCAAAGACTCGCCGGTTCTACTCGATGTCACTGGAATGATGTGCGGCGGCTGCGTCTCCCGAGTCAAAACCATTCTCTCCGCTGACGACCGAGTAGACTCCGTCGTGGTCAATATGTTGACTGAAACCGCAGCTGTTAAGCTTAGACGCCTCGAAGAGGAACACGCGAGCGTTGCTGAGAGTCTTGCTCTGCGATTGAGCCAATGCGGGTTTCCGACTAAGAAGAGGGAATCAGGGTTGGGAGTGGCGGAAAATGTTAGAAAGTGGAAGGAATTGGTGAAGAAGAAGGAGGAACTTCTCGCCAAGAGCCGTAACCGCGTCGCTTTCGCTTGGACTTTGGTCGCACTGTGCTGTGGATCGCATGCGTCGCATATTTTTCATTCTTTTGGGATTCATATTGCTCATGGACCGGTTATGGAATTTCTTCATAATTCATATGTGAAAGGTGGTTTAGCTTTGGGCGCTTTATTGGGACCTGGAAGAGAGTTGCTCTTTGATGGTCTAAATGCTTTCAAGAAAGGGTCGCCAAATATGAACTCTCTCGTGGGATTTGGTTCAATAGCTGCTTTCATCATCAGCTCGATCTCACTATTGAACCCCGAACTGGCATGGGATGCATCATTCTTTGATGAACCGGTCATGCTTCTTGGTTTCGTGCTTCTAGGACGTTCTCTGGAAGAAAAAGCAAGGATTCAGGCGTCTAGTGATATGAATGAATTACTTTCACTAATATCTACTCAGTCAAGACTTGTCATTACATCATCAGAAGGTTCCCAATCTACTGACAGCGTGCTTACCTCTGATGCAATTTGTGTGGAAGTTCCAACTGATGATATTCGAGTAGGAGACTCAGTGTTGGTGTTGCCTGGTGAAACTATTCCTATAGATGGAAGGGTTGTTGCAGGAAGAAGCGTTGTGGACGAATCCATGCTTACAGGAGAATCACTTCCTGTATTTAAGGAGGAAGGCCTCACAGTTTCAGCAGGAACTATAAACTGGGATGGTCCTTTAAGAATTGAATCTTCTTCGACTGGCTCCAACACAATGATATCTAAGATTGTACGCATGGTTGAGGATGCTCAATCACGTGAAGCACCTGTTCAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATTTAGCATAATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTTTTGGAACACACATATTTCCTGATGTTTTGCTCAATGATATTGCGGGCCCGGAAGGAGATCCTCTGCTTTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCACTGGGTCTTGCCACACCAACAGCAATCCTAGTTGGCACCTCACTTGGGGCAAGAAAAGGACTTCTTATCAGAGGAGGGGATGTCCTAGAACGCTTGTCCGGTGTAAATTATATTGCTCTAGATAAGACAGGAACCCTTACCAGAGGAAAACCAGTTGTTTCTGCCATATGCTCTATTGAGTATGGAGAGTCGGAAGTTCTTCAGATTGCTGCGGCAGTGGAGAAAACTGCATCTCATCCAATAGCAAAGGCTATTATTAATAAAGCTGAGTCATTAGAGTTGGTCCTTCCACTCACAAAAGGACAGATAGTTGAACCAGGTTTTGGAACCTTGGCAGAAATAGATGGGCGTTTGGTTGCGATAGGGTCTCTAGAATGGGTCCGTGAACGCTTCAAGACTAGAATGAACCCATCTGCTTTAATGAATCTTGAACATGCTTTGATGAATCATTCATCGGGTGCATCATCTTCGAAGTATTCTAAAACTGTTGTCTACGTTGGACGTGAAGGAGAAGGCATCATTGGCGCTATTGCCATATCTGACAATGTGCGGGAGGATGCTGAATCCACTGTAATGAGGCTCAAGAAGAAGGGGATTAAAACGGTCCTCTTATCAGGAGACAGGGAAGAGGCAGTTGCAACAATAGCAGAGAGAGTTGGAATTGAAAATGATTTTGTCAAAGCATCCTTGTCTCCGCAGCAGAAATGTGCATTTATTTCATCTCTAAAAGCTGCTGGACATCGTGTTGCGATGGTAGGTGATGGGATCAATGATGCGCCCTCTTTGGCTGCAGCTGATGTTGGGATAGCTCTGCAGAATGAAGCTCAAGAGAATGCTGCCTCAGATGCAGCCTCCATCATACTTCTGGGCAACAAAATTTCACAGGTTATTGATGCATTAGACCTAGCACAGGCAACAATGGCAAAAGTTTACCAAAATTTGTCTTGGGCAGTGGCTTACAATGTTGTTGCCATTCCCATTGCTGCTGGTGTGTTACTTCCCCAATTTGACTTTGCTATGACACCATCACTTTCAGGAGGACTGATGGCTATGAGCTCCATCTTGGTGGTTAGCAACTCACTGCTTTTAAAGCTTCATGGATCTCAGACCGCTGGAAAGGGATCGCTGTAG 2655 0.4565 MATHLLSFSLSSPANLSLNLNHHRHFISLLPSKLRRSRHLNRRQISRPYFSVSNSISTEIRSSESPLLQRQPQIKDSPVLLDVTGMMCGGCVSRVKTILSADDRVDSVVVNMLTETAAVKLRRLEEEHASVAESLALRLSQCGFPTKKRESGLGVAENVRKWKELVKKKEELLAKSRNRVAFAWTLVALCCGSHASHIFHSFGIHIAHGPVMEFLHNSYVKGGLALGALLGPGRELLFDGLNAFKKGSPNMNSLVGFGSIAAFIISSISLLNPELAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGSQSTDSVLTSDAICVEVPTDDIRVGDSVLVLPGETIPIDGRVVAGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIESSSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVFSIMTLSAATFAFWYFFGTHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLSGVNYIALDKTGTLTRGKPVVSAICSIEYGESEVLQIAAAVEKTASHPIAKAIINKAESLELVLPLTKGQIVEPGFGTLAEIDGRLVAIGSLEWVRERFKTRMNPSALMNLEHALMNHSSGASSSKYSKTVVYVGREGEGIIGAIAISDNVREDAESTVMRLKKKGIKTVLLSGDREEAVATIAERVGIENDFVKASLSPQQKCAFISSLKAAGHRVAMVGDGINDAPSLAAADVGIALQNEAQENAASDAASIILLGNKISQVIDALDLAQATMAKVYQNLSWAVAYNVVAIPIAAGVLLPQFDFAMTPSLSGGLMAMSSILVVSNSLLLKLHGSQTAGKGSL* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0704 884 Pfam haloacid dehalogenase-like hydrolase 543 774 - -
Psa5g0704 884 SUPERFAMILY Calcium ATPase, transmembrane domain M 283 541 IPR023298 -
Psa5g0704 884 SFLD p-type atpase 530 813 IPR044492 -
Psa5g0704 884 PRINTS P-type cation-transporting ATPase superfamily signature 380 394 - -
Psa5g0704 884 PRINTS P-type cation-transporting ATPase superfamily signature 547 561 - -
Psa5g0704 884 PRINTS P-type cation-transporting ATPase superfamily signature 683 694 - -
Psa5g0704 884 PRINTS P-type cation-transporting ATPase superfamily signature 705 715 - -
Psa5g0704 884 PRINTS P-type cation-transporting ATPase superfamily signature 760 779 - -
Psa5g0704 884 Gene3D - 558 691 IPR023299 GO:0000166
Psa5g0704 884 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 871 IPR027256 GO:0006812|GO:0016021|GO:0019829
Psa5g0704 884 Coils Coil 159 179 - -
Psa5g0704 884 PANTHER ATP7, ISOFORM B 64 873 - -
Psa5g0704 884 CDD HMA 81 120 IPR006121 GO:0046872
Psa5g0704 884 ProSiteProfiles Heavy-metal-associated domain profile. 78 148 IPR006121 GO:0046872
Psa5g0704 884 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 334 852 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa5g0704 884 Gene3D - 303 434 - -
Psa5g0704 884 Gene3D - 538 811 IPR023214 -
Psa5g0704 884 SUPERFAMILY HMA, heavy metal-associated domain 79 121 IPR036163 GO:0046872
Psa5g0704 884 Pfam E1-E2 ATPase 340 527 - -
Psa5g0704 884 Pfam Heavy-metal-associated domain 81 144 IPR006121 GO:0046872
Psa5g0704 884 SUPERFAMILY HAD-like 545 868 IPR036412 -
Psa5g0704 884 SUPERFAMILY Calcium ATPase, transduction domain A 340 430 IPR008250 -
Psa5g0704 884 ProSitePatterns E1-E2 ATPases phosphorylation site. 549 555 IPR018303 -
Psa5g0704 884 Gene3D - 72 151 - -
Psa5g0704 884 SFLD C1.7: P-type atpase like 530 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0704 Psa-Chr5 56808407 56818386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0704 242 872 Primary Pumps ATPases AT1G63440 37.383 9.90e-117 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0704 K17686 - gmx:100127402 1403.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0704 5 56808407 56818386 Psa5g0704 5 56808407 56818386 ECH