Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa5g0703 | ATGAGTTTGCGCAAGGGCTCCAAGGTTTGGATTCCTGACAGGGACTTTGCTTGGTTACCCGCTGAAGTTCTCGAATCTTCCGAAAAGCAAGTTCGCGTTGAAACGGATTCCGCCAACAAGGTTGTTGTTGTTGCTCCGGAGAAATTGTTTCCTAGGGATGCGGATGAAGATGAGCACGGTGGAGTCGAAGATATGACGAGGCTGGCTTATTTGAATGAACCAGGGGTGTTGTACAATATTCGGAGAAGATACATGCTTAATGATATATATACATATACTGGGAGCATTTTAATTGCTGTTAATCCGTTCACAAAGCTTCCTCATTTGTACAATAACCACATGATGGAGCAGTATAAGGGAGCTCCATTTGGTGAACTCAGTCCACACGTATTCGCCGTTGCTGATGCATCGTATAGAGCAATGATGAATGAAGGTCATAGCCAATCTATTTTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACTGAAACAACAAAATTAATTATGCAGTATCTTACCTTTGTTGGCGGGCGTGCTGTTTGTGATGATAGATCAGTTGAACAAAAAGTTCTTGAGTCGAATCCACTGTTAGAGGCATTTGGCAATGCAAGGACCGTCAGAAATGACAATTCAAGCCGTTTTGGGAAGTTCGTTGAAATTCAGTTTGATTCAAAGGGTAAAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCACGAGTAGTGCAGACTACACATCCTGAAAGAAATTATCACTGCTTTTATCAGTTGTGTGCATCTGAAAGGGATGCAGAGAAGTATAAGTTAGGACATCCGAGCCACTTCCACTATTTGAATCAAAGTAAAGTTTATGAATTAGATGGTGTTAGCAGTGCCGAAGAATACATAAAGACGAGAAGATCAATGGATATTGTTGGCATTAGTCACGAGGATCAGGAAGCTATCTTTTGCACCTTAGCAGCAATTTTACATCTTGGAAATGTTGAATTTTCTCCTGGGAAAGAGCACGACTCGTCAATATTAAAGGATGAGAAATCAATATTTCATTTGCAGATGGCTGCTAATCTTTTCAAGTAG | 1080 | 0.4083 | MSLRKGSKVWIPDRDFAWLPAEVLESSEKQVRVETDSANKVVVVAPEKLFPRDADEDEHGGVEDMTRLAYLNEPGVLYNIRRRYMLNDIYTYTGSILIAVNPFTKLPHLYNNHMMEQYKGAPFGELSPHVFAVADASYRAMMNEGHSQSILVSGESGAGKTETTKLIMQYLTFVGGRAVCDDRSVEQKVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSKGKISGAAIRTYLLERSRVVQTTHPERNYHCFYQLCASERDAEKYKLGHPSHFHYLNQSKVYELDGVSSAEEYIKTRRSMDIVGISHEDQEAIFCTLAAILHLGNVEFSPGKEHDSSILKDEKSIFHLQMAANLFK* | 360 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa5g0703 | 359 | Pfam | Myosin head (motor domain) | 62 | 352 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Psa5g0703 | 359 | Gene3D | - | 250 | 307 | - | - | |
| Psa5g0703 | 359 | PANTHER | MYOSIN | 5 | 358 | - | - | |
| Psa5g0703 | 359 | Gene3D | Kinesin motor domain | 63 | 249 | IPR036961 | - | |
| Psa5g0703 | 359 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 9 | 356 | IPR027417 | - | |
| Psa5g0703 | 359 | PANTHER | MYOSIN-15 | 5 | 358 | - | - | |
| Psa5g0703 | 359 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 309 | 358 | - | - | |
| Psa5g0703 | 359 | ProSiteProfiles | Myosin motor domain profile. | 60 | 359 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Psa5g0703 | 359 | SMART | MYSc_2a | 54 | 359 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Psa5g0703 | 359 | PRINTS | Myosin heavy chain signature | 90 | 109 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Psa5g0703 | 359 | PRINTS | Myosin heavy chain signature | 147 | 172 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Psa5g0703 | 359 | PRINTS | Myosin heavy chain signature | 194 | 221 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Psa5g0703 | 359 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 4 | 54 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa5g0703 | Psa-Chr5 | 56799285 | 56802719 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa5g0703 | 1 | 359 | Myosins gene family | AT4G33200 | 77.159 | 0.0 | 585 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa5g0703 | K10357 | - | gmx:100796413 | 625.165 |