Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0702 GTGTGATCTGAACCTACTGCAAGCAACATTATGCACTCGTTCAATACAAACCCGTGAAGGAAATATTGTCAAAGCTCTTGATCGTAATGCTGCTGTAGCTGGCAGGGATGTTATGGCGAAAACTGTCTATGCCCGTTTGTTTGATTGGCTTGTTGATAAGATTAATAAAGCGGTTGGGCAAGATATCAATTCCAGGATGCAAATTGGAATATTGGATATATATGGTTTTGAGTCTTTTAAGGATAACAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAACAACACTTTAATGAGCATGTATTCAAGATGGAGCAAGCGGAGTACAGAAAAGAAGAAATTAAATGGAGTTACATTGAGTTTATAGACAACCAAGATGTTTTAGATTTAATTGAAAAGAAGCCCATTGGTATAATTGCCCTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCACGAAACATTCTCAACCAAGTTGTTTAAGCACTTCTTGTGCCACACTAGGTTTGGAAAGGAGAAGTTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACATACCATACAGACACATTTTTAGACAAAAATCGCGATTATGTAGTTCTAGAGCATTGTAATGTATTATCGTCTTCAAAATGCTCTTTTGTGTCTGGTCTTTTTCCTTCTTTACCGGAGGAATCTTCAAGGTCATCCTACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAATCACTTATGGAAACACTCAAGACAACAGAGCCTCATTACATTCGATGCGTCAAGCCAAATTCCTTGAATTTACCACAAAAGTTTGAGAACACAAGTGTCTTACACCAATTACGTTGCGGGGGTGTACTTGAGGCGGTTCGGATAAGTCTGGCAGGTTACCCAACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAACTCCTGAGTTTACAGATGGAAGTTATGATGATAGAGCTACAACTCAGAAAATATTGCAAAAGCTAAAACTTGAGAATTTCCAGCTGGGTAGGACTAAAGTGTTTCTCAGGGCTGGTCAAATTGGTACTTTAGACTCTAGGCGAGCTGAAGTTTTGGACAATGCTGCAAAATGTATTCAGCGTCGACTGCATACATTTATTGCTCACAGAGATTTCATCTCAACTCGAGTCGCTGCAGTTTCTCTTCAAGCATGCTGCAGGGGATGCCTTGCAAGGAGGATATATGCTTTTAAACGGGAGACTGCAGCAGCTATGTCCATTCAGAAATATATTCGTATGAGTCTGATGAGGCGTGTTTACATGACACTGTACTCTTCTGCTATCATCATACAATCAAATGCCCGCGGTTTCACAACTCGCCAAAGATTTTTGCATAGAAAAGAACACAAAGCTGCTACTATTATTCAGGCGTATTGGAGGATGTGCAAGGTTCGGTCTGCTTTCAAACAACATCAATTTTCAATTGTGGCAATACAATGCCTTTGGCGCTGTAAACAAGCTAAAAAACAGCTTCGTAGACTTAAACAAGAGGCTAGTGAAGCTGGTGCCTTGCGTTTAGCCAAGACTAAACTTGAGAAACAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAAAAATTAAGGGTTTCTAATGAAGAGGCTAAGCAAGTTGAGATTTCCAAGTTTCAGAAGACATTGGAAGCTCTGAATTGTGAATTAGATGGAGCTAAATTGGCAACTATTAATGAGTCGAATAAGAATGCAATTTTGCAAAATCAATTGCAATTATCAGAAAAGGAAAAAAATGCTTTAGAAAGAGAGCTAGTTGTAATGAATGAAGTGCGAAAGGAAAATGCTCTGATGAAGGCTTCTATGGATGCCTTGGAAAAAAAGAGCACAGCTTTGGAGCATGAGCTTGTGAATGCTCAAAAAGACCATAATGAAACCATTCAGAAAATGAGGGAGTTTGAACAAAAGAGTTCTGAACTCGCACAAAATATGAAAAGTCTTGAAGAAAAGCTATTGAGTTTGGAGAATGAAAATCAAGTGCTTCGTCAGAAAGCATTAACTGTATCTCCTAAGAGTAATCGTCCTAGTTTTACAAAGTCATCATCAGAAAAATTCTCGAGGACAATAGCCCTCAACACTGAGCAAAACCCAGTATATGAATCACCTACACCCACGAAACTTATGCCCTCCTTTTCACGTGGCTTGTCAGATTCTCGTCGATCTAAATTAACAGCAGAAAGGCACCAGGATAACTATGAATTCCTCACTAGGTGTATCAAAGAGGATTTGGGTTTCAAAAAGAGTAAACCTGTGGCAGCTAGTATTATATACAAATGTCTTCTTCATTGGCATGCATTTGAGTCTGAGCGCACAGCCATATTTGATTACATAATTGATAGAATTAATGAAGTCATAAAAGTTAGAGATGATGACACTGTCTTGCCATATTGGTTGTCCAATACCTCCGCACTTGTGTGCCTTTTACAGAGAAATGTCCGTTCAAATGGTGTCTTAGCTACCACTGCTCAACGTTATGCTGGATCATCTGGCTTGACCAGCCGGATGGGGCATGCAATGAAGTCTCCATTGAAGTTAATTGGATATAATGATGGTATATCACATGTGGAGGCAAGATATCCAGCTATGCTTTTTAAACAACAACTAACTGCTTGTGTAGAGAAGATTTTTGGCCTAATACGTGATAATTTGAAAAAGGAGCTTTCTCCACTTCTGGCATTATGTCTTCAGGCACCCAAAACAGGACGGGCACAGAATGGAAAATCATCTAGATCTCCGGGGGGGCTTCCTCAGCAACCACCTGGCGGCCAATGGGACAACATCATCAATTTTTTGAATTCACTCTTGAACCAATTATGTGTGAATAATATACCATCCTTCTTCATCCGCAAGCTAGTTACACAGGTCTTTTCCTTCATCAATATGACGCTGTTCAACAGTCTTCTTTTGCGCCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGTCTTGCAGAACTGGAGAAATGGATAGTTAATGCAAATGAAGAGTATGCAGGAACATCCTGGCATGAGCTGAATTATATAAGACAGGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAAATTAGGCAGGATCTTTGTCCGGCATTAACTGTGAGGCAAATCTATCGAATTAGTACTATGTATTGGGATGACAAGTATGGAACCCAGAGTGTATCCAACGAGGCAATTGGTCAAATGAGGGAAATTGTGAGCAAAGACAATCAGAGTTTGACCTCAAATTCTTTCTTGATGGATGACGACATGAGTATTCCTTTTTCTGCTGAAGACATAGATATTGCAATCCCTGCTGTGAATACTGATGATATTGAGCTCCCAGCATTCTTGTCTGAATATCCTTGTGCCCAGTTTCTTGTTTTGCATGAGTAA 3475 0.3942 CDLNLLQATLCTRSIQTREGNIVKALDRNAAVAGRDVMAKTVYARLFDWLVDKINKAVGQDINSRMQIGILDIYGFESFKDNSFEQFCINFANEKLQQHFNEHVFKMEQAEYRKEEIKWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLCHTRFGKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVLEHCNVLSSSKCSFVSGLFPSLPEESSRSSYKFSSVASRFKQQLQSLMETLKTTEPHYIRCVKPNSLNLPQKFENTSVLHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLITPEFTDGSYDDRATTQKILQKLKLENFQLGRTKVFLRAGQIGTLDSRRAEVLDNAAKCIQRRLHTFIAHRDFISTRVAAVSLQACCRGCLARRIYAFKRETAAAMSIQKYIRMSLMRRVYMTLYSSAIIIQSNARGFTTRQRFLHRKEHKAATIIQAYWRMCKVRSAFKQHQFSIVAIQCLWRCKQAKKQLRRLKQEASEAGALRLAKTKLEKQLEELTWRLHLEKKLRVSNEEAKQVEISKFQKTLEALNCELDGAKLATINESNKNAILQNQLQLSEKEKNALERELVVMNEVRKENALMKASMDALEKKSTALEHELVNAQKDHNETIQKMREFEQKSSELAQNMKSLEEKLLSLENENQVLRQKALTVSPKSNRPSFTKSSSEKFSRTIALNTEQNPVYESPTPTKLMPSFSRGLSDSRRSKLTAERHQDNYEFLTRCIKEDLGFKKSKPVAASIIYKCLLHWHAFESERTAIFDYIIDRINEVIKVRDDDTVLPYWLSNTSALVCLLQRNVRSNGVLATTAQRYAGSSGLTSRMGHAMKSPLKLIGYNDGISHVEARYPAMLFKQQLTACVEKIFGLIRDNLKKELSPLLALCLQAPKTGRAQNGKSSRSPGGLPQQPPGGQWDNIINFLNSLLNQLCVNNIPSFFIRKLVTQVFSFINMTLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNANEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEAIGQMREIVSKDNQSLTSNSFLMDDDMSIPFSAEDIDIAIPAVNTDDIELPAFLSEYPCAQFLVLHE* 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0702 1157 Pfam IQ calmodulin-binding motif 399 417 IPR000048 GO:0005515
Psa5g0702 1157 Pfam IQ calmodulin-binding motif 423 442 IPR000048 GO:0005515
Psa5g0702 1157 Pfam IQ calmodulin-binding motif 471 491 IPR000048 GO:0005515
Psa5g0702 1157 Pfam IQ calmodulin-binding motif 447 465 IPR000048 GO:0005515
Psa5g0702 1157 Coils Coil 590 690 - -
Psa5g0702 1157 MobiDBLite consensus disorder prediction 723 744 - -
Psa5g0702 1157 SMART iq_5 396 418 IPR000048 GO:0005515
Psa5g0702 1157 SMART iq_5 421 443 IPR000048 GO:0005515
Psa5g0702 1157 SMART iq_5 492 514 IPR000048 GO:0005515
Psa5g0702 1157 SMART iq_5 444 466 IPR000048 GO:0005515
Psa5g0702 1157 SMART iq_5 469 491 IPR000048 GO:0005515
Psa5g0702 1157 CDD MyosinXI_CBD 752 1124 IPR037975 GO:0007015
Psa5g0702 1157 MobiDBLite consensus disorder prediction 691 711 - -
Psa5g0702 1157 MobiDBLite consensus disorder prediction 723 748 - -
Psa5g0702 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 421 IPR027417 -
Psa5g0702 1157 ProSiteProfiles IQ motif profile. 397 426 IPR000048 GO:0005515
Psa5g0702 1157 Gene3D Kinesin motor domain 230 305 IPR036961 -
Psa5g0702 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 520 IPR027417 -
Psa5g0702 1157 Gene3D - 306 372 - -
Psa5g0702 1157 Coils Coil 562 582 - -
Psa5g0702 1157 Coils Coil 506 526 - -
Psa5g0702 1157 ProSiteProfiles IQ motif profile. 470 499 IPR000048 GO:0005515
Psa5g0702 1157 PANTHER MYOSIN 2 1154 - -
Psa5g0702 1157 Gene3D - 84 229 - -
Psa5g0702 1157 PRINTS Myosin heavy chain signature 120 148 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa5g0702 1157 PRINTS Myosin heavy chain signature 67 95 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa5g0702 1157 SMART DIL_2 976 1083 IPR002710 -
Psa5g0702 1157 PANTHER PROTEIN OPAQUE1-LIKE 2 1154 - -
Psa5g0702 1157 ProSiteProfiles IQ motif profile. 445 474 IPR000048 GO:0005515
Psa5g0702 1157 ProSiteProfiles Myosin motor domain profile. 1 371 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa5g0702 1157 Pfam Myosin head (motor domain) 5 359 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa5g0702 1157 Gene3D Myosin VI head, motor domain, U50 subdomain 1 83 - -
Psa5g0702 1157 SMART MYSc_2a 1 372 IPR001609 GO:0003774|GO:0005524|GO:0016459
Psa5g0702 1157 Gene3D - 471 521 - -
Psa5g0702 1157 Gene3D - 424 470 - -
Psa5g0702 1157 Gene3D - 373 423 - -
Psa5g0702 1157 ProSiteProfiles IQ motif profile. 422 448 IPR000048 GO:0005515
Psa5g0702 1157 Pfam DIL domain 977 1080 IPR002710 -
Psa5g0702 1157 Coils Coil 1155 1157 - -
Psa5g0702 1157 ProSiteProfiles Dilute domain profile. 801 1101 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0702 Psa-Chr5 56766510 56792250 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0702 1 1154 Myosins gene family AT4G33200 69.584 0.0 1628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0702 K10357 - gmx:100796413 1910.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0702 5 56766510 56792250 Psa5g0702 5 56766510 56792250 ECH