Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0671 ATGTCTTCAAGTGTGACTAACCGTATTGTGCAGTGCTCAATCGCAACCGCATCAGGTGGCGAAACCAATTATCCCGCCAAATTCCAACCACCTTCTTTCTCAACGGTTACGTTTCGTTCCGATAGGTCCAACGACCATGCCTCTTCAGAGGTTTCGAGTAGCAGTAGGAGAGGGTTAATGTGCAGCATAGCCACGTTGCCATGTCTACTTCCACTAACTCACATCTTTGGTTCTCTCCGAGCCAACGCCAATGCCATGCTACCACCAGGTGGGGATGAATATGTTCGAATTAAAGAAGAGTTGAAGAAGGTATTGTCAAAGGGAAAGGCCGCTGGTGTGCTTCGTTTGGTTTTTCATGATGCTGGAACTTTTGAAATTGATCACGATGCAGGTGGCATGAATGGTTCTATAGTCTACGAACTTGAAAGACCTGAAAATGCTGGTCTGAAAAAATCAGTAAAGGTTCTGCAGAAAGCCAAGACTCAGATAGATGCGATCCATCCAGTATCCTGGGCGGACGTTATTGCTGTTGCTGGAGCTGAAGCAATTGAAGTATGCGGTGGTCCTACTATCCAAGTTTCGCTCGGCAGACATGATTCACTGGGGGCTGATCCTGAAGGGAAACTCCCTGAAGAAACCCTTGATGCTTCTGGTTTGAAAAGATGCTTCCAGAAAAAAGGCTTTTCAACACAAGAACTGGTAGCTTTGTCTGGAGCTCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCTACTTCTTTTGACAATTCATATTATAAGGTTCTGTTGGAAAAGCCACCGACGCCTTCTGGTGGTATGTCGACTATGATTGGTCTTCCTTCAGACCACGCACTCGTTGAGGATGATGAATGCTTAAGATGGATTAAAAAGTACGCAGACGATGAGAATATGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAAGTGGAGTAGCTTATAA 978 0.4489 MSSSVTNRIVQCSIATASGGETNYPAKFQPPSFSTVTFRSDRSNDHASSEVSSSSRRGLMCSIATLPCLLPLTHIFGSLRANANAMLPPGGDEYVRIKEELKKVLSKGKAAGVLRLVFHDAGTFEIDHDAGGMNGSIVYELERPENAGLKKSVKVLQKAKTQIDAIHPVSWADVIAVAGAEAIEVCGGPTIQVSLGRHDSLGADPEGKLPEETLDASGLKRCFQKKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPPTPSGGMSTMIGLPSDHALVEDDECLRWIKKYADDENMFFEDFKNAYVKLVNSGVKWSSL* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0671 325 ProSitePatterns Peroxidases active site signature. 110 121 IPR019794 GO:0004601
Psa5g0671 325 Gene3D Peroxidase, domain 2 210 312 - -
Psa5g0671 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 232 242 IPR019793 -
Psa5g0671 325 Gene3D - 98 319 - -
Psa5g0671 325 SUPERFAMILY Heme-dependent peroxidases 107 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Haem peroxidase superfamily signature 110 124 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Haem peroxidase superfamily signature 169 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Haem peroxidase superfamily signature 187 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Plant ascorbate peroxidase signature 110 125 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Plant ascorbate peroxidase signature 128 138 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Plant ascorbate peroxidase signature 168 186 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Plant ascorbate peroxidase signature 187 199 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Plant ascorbate peroxidase signature 208 225 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Plant ascorbate peroxidase signature 226 247 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PRINTS Plant ascorbate peroxidase signature 296 320 IPR002207 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 30 323 - -
Psa5g0671 325 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 30 323 IPR044831 GO:0004601|GO:0034599
Psa5g0671 325 Pfam Peroxidase 101 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa5g0671 325 ProSiteProfiles Plant heme peroxidase family profile. 110 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0671 Psa-Chr5 54363310 54366333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0671 110 315 Peroxidase AT4G16270 32.319 1.97e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0671 K00434 - gmx:100792735 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0671 5 54363310 54366333 Psa5g0671 5 54363310 54366333 ECH