Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0631 ATGGAAGGTGGTGAACTGAGAGTGGCGAGTGGACGCATTGGAAGCTCAAGCATATGGAGAAATGGTGCAGTTGATGTGTTTTCCGGATCTTCGCGAAGGGAGGACGATGAACAAGAGCTTCAATGGGCTGCTATTGAGAAGCTGCCAACCTATCTACGCGTGACTAGAGGCGTACTCGCCGAATCACAAGGTCAACAACCTATAGAGATTGATGTCAACAAACTTGGACCGTTGCAGAGGAAGAATTTAGTTGAGAGACTAGTTAGGATTGCTGAGGAAGATAATGAGAGGTTCTTGTTGAAGCTAAGACAACGTATAGATCGGGTTGGACTTGAATTTCCGACGATTGAAGTCCGTTTTGAGCACTTGAATGTTGAAGCGGAAGCTCGTGTGGGAAGCAGGGCATTGCCGACAATCCTCAATTTCTCCATTAATTTGTTTGAGGGCTTCATTAATTTTCTTCACCTTATCCCCAGTCGAAAGAAGCCGTTGACAGTTCTTCATGATGTTAGTGGAATCATCAAGCCGAAAAGAATGACACTGCTCTTAGGTCCTCCAAGTTCCGGAAAGACTACATTATTGTTGGCACTGGCCGGAAGACTCAGTAAAGATCTGAAATTTTCGGGGCGAGTTGCATATAATGATCACGGGATGGAAGAATTTGTACCACAGAGAACATCAGCTTATATAAGTCAAACTGATTTGCACATAGGAGAAATGACAGTCAGAGAAACATTGGCCTTTTCAGCTAGGTGTCAAGGGAGAGGAACTCGTTACGATATGCTTGCAGAATTATCAAGAAGAGAAAAGGCTGAAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCTGAAGCACTAGAAGGCCAAGAAACCAACATAGTTACAGATTATATAATTAAGATTTTGGGACTAGATGTTTGTGCTGATACCATGGTAGGGGATGGAATGATTCGAGGTATTTCTGGTGGACAAAAGAAGAGAGTCACGACTGGTGAGATGCTAGTTGGCCCAGCAAGAGCGCTTTTCATGGACGAAATATCGACTGGTTTGGACAGTTCCACAACATTCCAAATGATTAATTCACTTCGACAATCCATTCACATTCTGAATGGAACAGCTCTCATCTCTCTTCTGCAGCCAACACCTGAAACTTACGAGTTATTCGACGACATAATTCTCCTCTCAGACGGACAAATTGTGTATCAAGGTCCAAGGGAAAATGTCCTCGAATTCTTTCAACACATTGGTTTCAAATGTCCAGAGAGGAAAGGAGTAGCAGACTTTTTACAAGAAGTAACGTCAAGAAAAGAGCAAGAACAGTACTGGGAAAATAAAGATGAGCCATATAACTTTATCACCGTTAGAGAGTTTGCTGAAGCATTTCAATTATTTCATATTGGTCAAAAACTCGGTGATCAACTTGCTACTCCATTTGATACCTCCAAAGGCCACCCTGCTGTTTTAACCAAAAACAAGTATGGTGTGAGCAAGAAAGAACTCTTAAAAGCATGTGTATCCAGAGAACTTTTACTTATGAAAAGGAATTCGTTTGTGTATATTTTCAAGATGTGGCAGTTGATTTTCACTGGCATCGTAACAATGACAATGTTCCTACGAACCGAGATGCACAGGAATACAGAGACAGATGGTGGGATCTATATGGGTGCTCTATTCTTCATACTAATTGTAATTATGTTCAATGGATACTCTGAGTTATCGATGTTCATCATGAAACTCCCAGTTTTCTATAAGCAAAGGGACCTTCTTTTTTTCCCTGCTTGGGCATACTCTTTGCCTACATGGATCCTCAAAATTCCTATAAGTTTTGTAGAAGTTGGTATTTGGGTTGTGTTGACTTACTATGTTATAGGATTTGATCCATCTTTTGAAAGGTTCATCAAACAGTACTTTTTGCTAGTTTGTATCAATCAGATGGCATCTGCACTTTTTCGATTTATTGGCGCAGTTGGGAGAAACGTCATTGTTGCAAACACAGTTGGATCATTTGCTTTGCTTGCAGTTATGGTCATGGGTGGATTTATCCTCTCAAGAGTTGATGTTAAGAAGTGGTGGTTATGGGGTTACTGGGTCTCACCAATGATGTATGGACAGAATGCTATAACTGTGAATGAATTCCTTGGAAAGAGTTGGTCCCATATTCCACCTGGTTCAACAGAATCATTAGGAGTGCAGATTTTGAAGTCCCGTGGGATTTTCCCTGAAGCCTATTGGTATTGGATTGGAGTAGGAGCTTCCATCGGTTACATCTTACTATTCAACTTCCTTTTCCCTTTGGCCTTACATTATCTTGACTCATTTGATAAACCACAGGCTTTAATATCAGAAGAAGCCCTGGCTGAGAGAAATGCTGTCACTGCTGGAGATGGACAGATCATTGGATTATCGCCTAAAAGCGAATGTTCTTCAGCCAAAGGAAATGCAAGTCGAAGAAGTTTTTCTTCAACGACAGTGTCAGCAAAAGTAGGCAGCATTAGTGAAACTGATCACAGCAGGAAGCGGGGGATGGTTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCGGATATGAGGTGGACATGCCACAGGAAATAAAGGTCAAAGGAATTCTTGAAGATCGACTTGGACTTTTGAAGGGTGTTAATGGAGCGTTTAGACCAGGAGTTCTGACAGCTCTAATGGGTATAAGTGGAGCTGGTAAAACAACTCTAATGGATGTGTTGTCTGGAAGGAAAACAACAGGATACATTCAAGGACAAATCACTATATCCGGGTACCCTAAAAAGCAAGAAACTTTTGCTCGCATATCCGGATACTGTGAGCAAAATGATATTCACTCTCCCCATGTTACTGTCTATGAATCTCTTCTTTATTCTGCATGGCTCCGGTTGCCACCTGAGGTTGATTCTGCCACAAGAAAGATGTTTATTGAGGAAGTTATAGAGTTGATAGAGTTGACTTCAATAAGAGAAGCGCTCGTTGGATTGCCAGGTGTGAATGGTCTGTCCACGGAGCAGCGCAAAAGGTTAACAATTGCAGTTGAACTTGTTGCCAATCCATCTATTATATTCATGGATGAACCTACCTCTGGCCTTGATGCTAGAGCTGCTGCTATAGTAATGAGAACAGTGCGGAATACAGTTGATACAGGACGAACTGTTGTCTGCACAATTCACCAGCCTAGTATTGATATATTTGATGCTTTTGATGAGCTACTTCTCTTGAAGCGTGGAGGAGAGGAAATATATGTTGGACCATTAGGTCGCCATTGTTCTCATCTAATCAATTACTTTGAGGGAGTTAATGGAGTCCCGAAAATCAAGAATGGTTATAACCCTGCCACTTGGATGTTAGAGGTTACTTCAGAAGCACAAGAAGAAGCTCTCGGAGTTAACTTCGCCGAGCTTTACAAGAATTCTGAATTATACAGGAGAAACAAGGACTTGATCAGGGAACTCAGTACCCCTCCAGAGGGTTCTAAAGACTTGTACTTCACAACACAGCACTCGCAATCTTTCTTAACCCAGTGTATGGCTTGCCTTTGGAAGCAGCACCTATCGTATTGGCGAAATCCACCATACAGTGCAGTGAGACTTTTATTCACTACAGTCATTGCCTTCTTGTTCGGGACAATATTTTGGAATATTGGCAGCAAAAGGGAAAGAAAACAAGATCTATTTAACGCGATGGGATCCATGTATGCCGCAGTACTCTTCATCGGGGCACAAAATGCTACATCAGTGCAACCAGTTGTAGCCATTGAGCGAACAGTCTTCTATAGAGAAAAGGCTGCTGGAATGTACTCAGCATTGCCATATGCATTTGGACAGGTTGCTATTGAGATTCCATACGTACTCATACAGACCCTTCTATATGGCATTATAGTGTATATCATGATTGGGTTTGAGAAGACACCTACCAAGTTCTTTTGGTATCTATTCTTCATGTTCTTCACCTTGCTATACTTCACCTTCTTTGGAATGATGCTTGTGGGTGCTACACCAGATCACAACGTTGCTGCCATAGTTTCCTTTGGCTTCTACTTGTTATGGAACCTTTTCTCAGGATTCGTGATTCCCCGAACCAGAATGCCAATATGGTGGAGATGGTTTTTCTGGATTTGTCCTATCTCTTGGACTCTGTGTGGCTTGGTGACTACACAATTTGGTGATGTTAAAGAACATATAGATACTGGTGAGACCGTGGAAGAGTTTGTTAGAAGTTATTTCGGGTATGGAGATGAGTTAAAAGGTGTAGCAGCAGCTGTGGTAGTTGGTTTTTCACTAATCTTTGGATCTACCTTTGCCTTTTCAATTAAGGCATTTAATTTCCAAAAAAGATGA 4356 0.4155 MEGGELRVASGRIGSSSIWRNGAVDVFSGSSRREDDEQELQWAAIEKLPTYLRVTRGVLAESQGQQPIEIDVNKLGPLQRKNLVERLVRIAEEDNERFLLKLRQRIDRVGLEFPTIEVRFEHLNVEAEARVGSRALPTILNFSINLFEGFINFLHLIPSRKKPLTVLHDVSGIIKPKRMTLLLGPPSSGKTTLLLALAGRLSKDLKFSGRVAYNDHGMEEFVPQRTSAYISQTDLHIGEMTVRETLAFSARCQGRGTRYDMLAELSRREKAENIKPDPDLDIYMKAEALEGQETNIVTDYIIKILGLDVCADTMVGDGMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMINSLRQSIHILNGTALISLLQPTPETYELFDDIILLSDGQIVYQGPRENVLEFFQHIGFKCPERKGVADFLQEVTSRKEQEQYWENKDEPYNFITVREFAEAFQLFHIGQKLGDQLATPFDTSKGHPAVLTKNKYGVSKKELLKACVSRELLLMKRNSFVYIFKMWQLIFTGIVTMTMFLRTEMHRNTETDGGIYMGALFFILIVIMFNGYSELSMFIMKLPVFYKQRDLLFFPAWAYSLPTWILKIPISFVEVGIWVVLTYYVIGFDPSFERFIKQYFLLVCINQMASALFRFIGAVGRNVIVANTVGSFALLAVMVMGGFILSRVDVKKWWLWGYWVSPMMYGQNAITVNEFLGKSWSHIPPGSTESLGVQILKSRGIFPEAYWYWIGVGASIGYILLFNFLFPLALHYLDSFDKPQALISEEALAERNAVTAGDGQIIGLSPKSECSSAKGNASRRSFSSTTVSAKVGSISETDHSRKRGMVLPFTPLSITFDEIGYEVDMPQEIKVKGILEDRLGLLKGVNGAFRPGVLTALMGISGAGKTTLMDVLSGRKTTGYIQGQITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPPEVDSATRKMFIEEVIELIELTSIREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGRHCSHLINYFEGVNGVPKIKNGYNPATWMLEVTSEAQEEALGVNFAELYKNSELYRRNKDLIRELSTPPEGSKDLYFTTQHSQSFLTQCMACLWKQHLSYWRNPPYSAVRLLFTTVIAFLFGTIFWNIGSKRERKQDLFNAMGSMYAAVLFIGAQNATSVQPVVAIERTVFYREKAAGMYSALPYAFGQVAIEIPYVLIQTLLYGIIVYIMIGFEKTPTKFFWYLFFMFFTLLYFTFFGMMLVGATPDHNVAAIVSFGFYLLWNLFSGFVIPRTRMPIWWRWFFWICPISWTLCGLVTTQFGDVKEHIDTGETVEEFVRSYFGYGDELKGVAAAVVVGFSLIFGSTFAFSIKAFNFQKR* 1452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0631 1451 SMART AAA_5 891 1083 IPR003593 -
Psa5g0631 1451 SMART AAA_5 176 408 IPR003593 -
Psa5g0631 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 1091 IPR027417 -
Psa5g0631 1451 Pfam ABC-2 type transporter 1179 1393 IPR013525 GO:0016020|GO:0140359
Psa5g0631 1451 Pfam ABC-2 type transporter 503 715 IPR013525 GO:0016020|GO:0140359
Psa5g0631 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 863 1106 IPR003439 GO:0005524
Psa5g0631 1451 Gene3D - 154 459 IPR027417 -
Psa5g0631 1451 Pfam ABC-transporter N-terminal 91 142 IPR029481 -
Psa5g0631 1451 Gene3D - 872 1096 IPR027417 -
Psa5g0631 1451 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 12 1451 - -
Psa5g0631 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 424 IPR027417 -
Psa5g0631 1451 Pfam ABC-2 type transporter 382 435 IPR043926 GO:0140359
Psa5g0631 1451 Pfam Plant PDR ABC transporter associated 720 783 IPR013581 -
Psa5g0631 1451 PANTHER ATP-BINDING CASSETTE TRANSPORTER 12 1451 - -
Psa5g0631 1451 Pfam ABC transporter 882 1034 IPR003439 GO:0005524
Psa5g0631 1451 Pfam ABC transporter 167 349 IPR003439 GO:0005524
Psa5g0631 1451 CDD ABCG_PDR_domain2 851 1089 IPR034003 -
Psa5g0631 1451 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 424 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0631 Psa-Chr5 50251672 50259071 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0631 5 50251672 50259071 Psa6g0695 6 23609178 23616155 PCT