Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0607 ATGGATAATCAAGCGAATCAAAATCAAGTTCAACCTCCACGTGATGAAGAAGAAGAAGAGGAAGATCCTTCTAAGATGGAAGATGAAGAGTTAATTGCAAAGGTTAACACACTCATGGATAAAATCACTTCCTCTCCCGATAACCCCAAACCTAACGTTCTACATGCTCTGGCATCCATTCTCGAAACTCAAGAGACTCGATACATGGAAGATAATAGTCATTCTTCATCTACCAATGCCCGTGCTGCTCATAACATTGGGCGTCTTGGGGGTATAATTCGGGAAAACGATGATTTCTTTGAGTTAATATCTTTGAAGTTTCTGTCAGAAACTGGATACTCAACTGCGGTTCGAGCTGCTGCTGTCAGACTTATCTTGTGCTGTTCTCTAACTTGGATTTATCCTCATGTTTTTGAAGAACCGGTTCTCGAGAACTTAAAAAATTGGGCGACTGATGATAGGGCCGAGGAGCAAAATCTGAAACCTGATCTGGGGATAAAGGAGGCCTCAGATTCTGAAATGTTGAAAGCATATTCTACTGGGCTCCTTGCCGTGTGTTTGGTCGGCGGAGGTCAAATAGTGGAAGATGTATTAACATCTGGCTTGTCAGCTAAGCTGATGCGTTATCTTCGAGTGCGTGTGCTGGGTGAGTCAAGTGGCAGCCAGAAAGATATTAGTCATTTATCCGAAAACAAACATTCATCTGGGAATACTCCAGTAAGAGGTAGAGATGATGGTCGTGGAAGGTTTCGCCAGCTCCTGGAAATGAGTCATTTAGGTGATACAAGGATTAATGAAGAGGGATCGTTAGATGACCAAGGTCCTGAACAGGCTCAGGATAGAACTGTTAGTGGACAGGCTTGCCAAGAAGATCCCTGGATAGATGATGAACCATCTGATGGACTCAGCAAAAGTGCTGATGTTGGTGAGGTGGATTCTGATGGGGAGGATAGATGGCGTTGTAGAGATATCCGTGATGGCTGGATAAAATATGGCGAGCATGAAGACAATGGTAGGGACGAATCTTCAAGGCGGCGTACTAACCGTGGATGGGGAAGATCAAGGGGGAAAGGAAGGGCCAATGAAGGGCTGGTAGAAAGTGAACCGATTTTGTCATCTGCTGGGTCTGCCAGTCGATTAGGGCAGGGGCGGAGTGGTAGAGATAGGAGTTCTTTGAAGAACACTGATGTTAAACGGATACCTGATTCTAAAAAGGCTCTTACCAGTACCGTTTCCGAAGCTTTCATCTCCGAAAGAGAGGATAATGATGCTTGTTTCCAAGAGTGCTTTATTGGAAGTAAAGATATCTCTGATCTTGTTCGAAAAGCAGTCCAAGCCGCTGAGGCTGAAGCTAGATCAGACAATGCCCCTGAAGAAGCTGTCAAAGCAGCTGGTGATGCTGCTGCCGACCTTGTTAAAACTGCAGCTTTAGAGGAATACAAATCCACCAACAATGAAGAGGTAGCTTTTTTGGCTGCATCTAGAGCTGCATCAACGGTTATCGATGCTGCATCTGCTGTTGAAGTTTCAAGGAAATCTGTATGCATTAGTACAGAGACAGAGAATGTTAGTGGCAGAGAAACAGAATCTAGTGAGGATGTTGAAGATTATTTCATCCCAGACATTCAAATACTTACACAATTGAGGGAAAAATACTGCATTCAGTGTCTTGCGTTACTTGGAGAATATGTAGAAGTTCTTGGACCTGTATTGCACGAGAAGGGGGTTGATGTTTGTCTTGGACTTTTGCAGCAAAGTTCTAAACATCAGGATCCATCGAAGGTTGCTTTCCTGTTGCCCGATGTCATGAAGCTGATATGTGCTTTAGCTGCCCATAGGAAATTTGCTGCACTATTTGTGGACCGTGGAGGAATGCAAAAGCTGCTTGCTGTACCTAGAATGGCTCAAACATTCTTTGGCCTTTCTTCTTGTCTATTTACTATTGGTTCCCTTCAGGGGATAATGGAACGAGTTTGTGCTCTTCCTTCTGATGTCATTTATCACGTAGTTGAGTTGGCTCTCCAACTCATTGAGTGTAATCAAGATCTTGCCCGGAAGAATGCAGCATTGTTTTTTTCTGCCGCATTTGTATTCAGAGCAGTACTCGATGCTTTCGACTCTCAGGATGGCTTACAGAAATTACTGGGCCTTCTCAATGATGCTATTTCCATAAGATCAGGAGTAACTTCTGGAGCCTTGGGCTCGTCTAACTCAGGGTTACTTCGAAATGACAGAACGTCATCTGCAGAAGTGCTGACATCATCTGAGAAGCAGGTAGCCTATCACACTTGTGTTGCTCTGCGGCAATATTTCAGAGCACACCTCCTATTATTAATAGATTCTATTCGTCCAAACAAAAGCAATCGCAGTGCTGCTAGAAATATTCCAAGTACAAGGGCTGCTTACAAGCCACTTGATATTAGTAATGAGGCAATGGATGCAGTATTCCTACAATTACAAAAAGATCGGAAGCTAGGTCCTGCATTTGTGAGAACAGGTTGGCGGGAAGTCGAAAAGTTCTTGGCATCTAATGGGCATATTACTATGTTGGAATTGTGTCAGGCCCCAACTGTGGAACGATATCTACATGATTTGCTACAGTATGCATTGGGGGTTTTGCAAATTGTTACATTAGTACCTAGCAGTCGAAAGATGATTGTAAATGCAACATTAAGCACCAACCGTTCTGGTATTTATGTAATTTTGGATGCAGCAAATATTAGCAATAGTCATGTGGACCCCGAGATAATTCAATCAGCATTAAATGTTTTAATCAACCTTGTTTGCCCTCCTCCTTCAATCAGCAATAAACCACCTGTAGTGTCACAAGGCCAGCAGTTTGCGTCTTCCCAAACCTCTAATGGTGCTCTGTCAGAGGCTAGAGATAGATATGCCGACCGATCTGCTCAAGTCTCCAGCCATGTTGATCCTAGGGAGAGGAATGGGGAGTCCAGTGCTATAGATCGTGGCAATGCTGCAGCACTTATTCCACAATCTGTGAATAGTACTCCCCAAACTCCCGTTCCCTCTGCAAGCTCAGGCTTGGTTGGTGATCGAAGAATAACTCTGGGTGCAGGAGCACGCTGTGCCGGCCTTGCTACACAGCTGGAACAAGGATATCACCAGGCAAGAGAGGCTGTCTGTTCTAGTAATGGTATAAAGGTTCTTATACAAATCATCTCTTCACGTGTATATTCATCTCCTGCTGCTCTGGACTGCCTTCGTGCTCTAGCTTGTCGAGTTCTGCTTGGATTAGCCAGAGATGACAATATTGCACATACATTGACAAAACTTCAGGTCGGGAAAAAAGTGTCTGACATAATTCGAGATTCAGGTAGCACAACACTTGGAACAGAACAGGGTAGGTGGCAAGCTGAACTATCCCAGGCTGCAATTGAGCTAATTGGGATTGTGGCTAATTTAGGACGTGCAAGCACATTAGTTGCTAGTGATGCAGCTACTCCTACATTAAGGCGCATTGAAAGAGCTGCTATAGCTGCTGCCACTCCTATTACTTACCCTTCAAGTGAACTCTTGCTCTTAATTCATGAACATTTACAGGCATCTGGATTGGGGCAAACTGCTTCTTTATTGCTTAAAGAGGCTCAGTTAACTCCTTTGTCATCATTACTTGCTCCATCTTCTCTAGCACAACAACCTTCAACACAAGAAGCTTCTTCAACACAGGTTCAGTGGCCTTCTGGTCGTACTCCTAGTGGATTTCTTACTAGCAAATTAAAGTCTAATTCAAAGAATGAAGACGCTTGCTTGAAAAGTGACGCCATCTCTGCAAAGAAAAAGTCACTAACTTTCTCATCGTCTTTTGGTTCCCATACAAGACACCAAGTCATTGACTCTCGGCAATCATCAGCCAGAAAATTGTTACGTACTGGGAAAGACTCTTCAGAAATTTGTATATCAGAGAATCCATCTGAATCTTCAGTGAAACCTAACTCTGAAACTGGACCTCAGTTCAAGACTCCAATCACCTTGCCGTCCAAACGGAAGTTATCGGATTTAAAGGATATACCAATGTTATCATCATCTGGCAAGCGACTAAATGTTGGGGATCCGGGACTTCGCTCTCCTATTTCCTCGAGTGTAGTTCGTAAAAGCAGCCTGCATACTGATGCTGTTGGGCTTTTCACTCCAACTAGTAATTTGAGGAGTCATCATGGCCGATGTACAGCTGACTATGTGGATGAGAACCAGCACTGCATCTCTAGTCTGACGACACCTTCCTCCCAAGTAGTAAATGACCTCCAGCCCAACAACCTTGAGCGCGTGACCCTAGATTCTCTTGTGGTACAGTATCTGAAACATCAGCATCGCCAATGTCCAGCCCCCATTACTACCCTTCCCCCAATATCTCTTCTGCACCCACATGTTTGTCCTGAACCTAAGCGAAGCCTCGATGCCCCCTCTAATGTGACTGCTCGCCTTGGTACCCGCGAATTTAAGTTTATGTATGGTGGAGTACATGGTAATCGCAGGGATCGTCAATTTGTTTTCAGCCGGTTTAGGCCATGGCGCACTTATCGGGATGATGCCGGTGCATTATTTACTTGCATTACATTTGTTGGAGACTCTTCTCATATTGCCGTGGGTAGCCATACTGGAGAACTCAAATTTTTTGATTCCAACAACAGTAACGTGGTAGAGAGCTTCACAGGTCACCAGTCTCCGTTGACCCTAGTTCAGTCTTTTGTGTCTGGTGAGACCCAATTGTTGCTTTCTTCATGCTCTCAAGAGGTTAAGCTGTGGGATGCAACATCGATATTAGGTGGTCCCACCCGATCATTTGAAGGCTGTAAGGCTGCACGGTTTAGTAACTCTGGGAATGCTTTTGCTGCCCTGTCATCAGAATCTACCGGACGGGAAATCCTTTTATATGATATTGAAAGTTATCAGTTAAAAGAGAAGTTGTCTGATACATCAACTATTTCTACAGGGCGGGGTCATGTTTATTCTTTAATCCACTTTAGCCCCGCCGATTCAATGCTGCTTTGGAATGGTGTCCTATGGGACCCGCGAGTGTCTACGCCTGTTCATCGCTTTGATCAGTTCACAGATTATGGAGGTGGAGGTTTTCATCCTGCTGGAAATGAGGTTATTATAAACTCTGAAGTCTGGGATCTCCGCAAATTCAGACTTCTGCGTAGTGTGGCTTCATTAGATCAGACATCAATAACATTCAATGCCCGTGGTGATGTTATGTATGCAATGTTAAGGAGAAATCTCGAGGATGTAATGTCAGCAATGCATGCACGTCGTGTCAAGCACCCACTGTTTTCAGCTTTTCGCACATTGGATGCAATAAATTATTCTGACATTGCTACTACACCTGTGGATCGCTGTGTTCTTGATTTTGCAACCGAGCCAACCGATTCATTTATTGGTTTGATTACCATGGATGATCAAGGTGAGATGTATTCATCAGCCAGATCATATGAAATTGGTCGTCGGAGGCCAACTGATGACGATTCTGATCCCGATGATGCTGAAAGCGAGGAGGAAGATGAAGATGAGGACGATGATGATGAAGATCCTCTTTTAGGCCCTGGCTTTGGCGGGGAAAGCGACAGTGATGCTGATGACATGAGCAATGATGATGATAGTGTAAGTGATCCCGATGATGATGATGATGAAGAAGGAGGTTTCATAATGAATGATGTAGACTTTGATGGAGAAGCAGACATGTTAGATATGGTATCGGATGGTGATGAGGAAGATGATGACAGTCAAGGACTTTCAGAGAGTAGTGACGATTATGACTTTGGTTATTAA 5787 0.441 MDNQANQNQVQPPRDEEEEEEDPSKMEDEELIAKVNTLMDKITSSPDNPKPNVLHALASILETQETRYMEDNSHSSSTNARAAHNIGRLGGIIRENDDFFELISLKFLSETGYSTAVRAAAVRLILCCSLTWIYPHVFEEPVLENLKNWATDDRAEEQNLKPDLGIKEASDSEMLKAYSTGLLAVCLVGGGQIVEDVLTSGLSAKLMRYLRVRVLGESSGSQKDISHLSENKHSSGNTPVRGRDDGRGRFRQLLEMSHLGDTRINEEGSLDDQGPEQAQDRTVSGQACQEDPWIDDEPSDGLSKSADVGEVDSDGEDRWRCRDIRDGWIKYGEHEDNGRDESSRRRTNRGWGRSRGKGRANEGLVESEPILSSAGSASRLGQGRSGRDRSSLKNTDVKRIPDSKKALTSTVSEAFISEREDNDACFQECFIGSKDISDLVRKAVQAAEAEARSDNAPEEAVKAAGDAAADLVKTAALEEYKSTNNEEVAFLAASRAASTVIDAASAVEVSRKSVCISTETENVSGRETESSEDVEDYFIPDIQILTQLREKYCIQCLALLGEYVEVLGPVLHEKGVDVCLGLLQQSSKHQDPSKVAFLLPDVMKLICALAAHRKFAALFVDRGGMQKLLAVPRMAQTFFGLSSCLFTIGSLQGIMERVCALPSDVIYHVVELALQLIECNQDLARKNAALFFSAAFVFRAVLDAFDSQDGLQKLLGLLNDAISIRSGVTSGALGSSNSGLLRNDRTSSAEVLTSSEKQVAYHTCVALRQYFRAHLLLLIDSIRPNKSNRSAARNIPSTRAAYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTGWREVEKFLASNGHITMLELCQAPTVERYLHDLLQYALGVLQIVTLVPSSRKMIVNATLSTNRSGIYVILDAANISNSHVDPEIIQSALNVLINLVCPPPSISNKPPVVSQGQQFASSQTSNGALSEARDRYADRSAQVSSHVDPRERNGESSAIDRGNAAALIPQSVNSTPQTPVPSASSGLVGDRRITLGAGARCAGLATQLEQGYHQAREAVCSSNGIKVLIQIISSRVYSSPAALDCLRALACRVLLGLARDDNIAHTLTKLQVGKKVSDIIRDSGSTTLGTEQGRWQAELSQAAIELIGIVANLGRASTLVASDAATPTLRRIERAAIAAATPITYPSSELLLLIHEHLQASGLGQTASLLLKEAQLTPLSSLLAPSSLAQQPSTQEASSTQVQWPSGRTPSGFLTSKLKSNSKNEDACLKSDAISAKKKSLTFSSSFGSHTRHQVIDSRQSSARKLLRTGKDSSEICISENPSESSVKPNSETGPQFKTPITLPSKRKLSDLKDIPMLSSSGKRLNVGDPGLRSPISSSVVRKSSLHTDAVGLFTPTSNLRSHHGRCTADYVDENQHCISSLTTPSSQVVNDLQPNNLERVTLDSLVVQYLKHQHRQCPAPITTLPPISLLHPHVCPEPKRSLDAPSNVTARLGTREFKFMYGGVHGNRRDRQFVFSRFRPWRTYRDDAGALFTCITFVGDSSHIAVGSHTGELKFFDSNNSNVVESFTGHQSPLTLVQSFVSGETQLLLSSCSQEVKLWDATSILGGPTRSFEGCKAARFSNSGNAFAALSSESTGREILLYDIESYQLKEKLSDTSTISTGRGHVYSLIHFSPADSMLLWNGVLWDPRVSTPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVASLDQTSITFNARGDVMYAMLRRNLEDVMSAMHARRVKHPLFSAFRTLDAINYSDIATTPVDRCVLDFATEPTDSFIGLITMDDQGEMYSSARSYEIGRRRPTDDDSDPDDAESEEEDEDEDDDDEDPLLGPGFGGESDSDADDMSNDDDSVSDPDDDDDEEGGFIMNDVDFDGEADMLDMVSDGDEEDDDSQGLSESSDDYDFGY* 1929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0607 1928 MobiDBLite consensus disorder prediction 1815 1928 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 1863 1919 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 237 270 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 960 985 - -
Psa5g0607 1928 Gene3D - 1507 1831 IPR015943 GO:0005515
Psa5g0607 1928 ProSiteProfiles LIS1 homology (LisH) motif profile. 1174 1206 IPR006594 GO:0005515
Psa5g0607 1928 MobiDBLite consensus disorder prediction 297 315 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 221 315 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 939 958 - -
Psa5g0607 1928 PANTHER BNAA03G51310D PROTEIN 1266 1816 - -
Psa5g0607 1928 PANTHER BNAA03G51310D PROTEIN 984 1278 - -
Psa5g0607 1928 PANTHER BNAA03G51310D PROTEIN 322 956 - -
Psa5g0607 1928 PANTHER BNAA03G51310D PROTEIN 20 256 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 371 388 - -
Psa5g0607 1928 SUPERFAMILY ARM repeat 554 1111 IPR016024 -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 221 236 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 939 987 - -
Psa5g0607 1928 SMART Lish 1174 1206 IPR006594 GO:0005515
Psa5g0607 1928 SMART WD40_4 1549 1589 IPR001680 GO:0005515
Psa5g0607 1928 SMART WD40_4 1594 1632 IPR001680 GO:0005515
Psa5g0607 1928 SMART WD40_4 1506 1546 IPR001680 GO:0005515
Psa5g0607 1928 MobiDBLite consensus disorder prediction 335 398 - -
Psa5g0607 1928 SUPERFAMILY WD40 repeat-like 1518 1740 IPR036322 GO:0005515
Psa5g0607 1928 MobiDBLite consensus disorder prediction 996 1015 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 996 1012 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 1830 1852 - -
Psa5g0607 1928 PANTHER VPRBP PROTEIN-RELATED 322 956 IPR033270 GO:0016567
Psa5g0607 1928 PANTHER VPRBP PROTEIN-RELATED 20 256 IPR033270 GO:0016567
Psa5g0607 1928 PANTHER VPRBP PROTEIN-RELATED 984 1278 IPR033270 GO:0016567
Psa5g0607 1928 PANTHER VPRBP PROTEIN-RELATED 1266 1816 IPR033270 GO:0016567
Psa5g0607 1928 MobiDBLite consensus disorder prediction 1215 1236 - -
Psa5g0607 1928 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0607 1533 1739 U-box Gene Family AT2G33340 24.664 1.51e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0607 K11789 - gmx:100796030 2768.03