Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g0601 | ATGACAATACCATCTCTAGTTAGAAGGCGTTCAAGTGGCGAAATAAGGAACTTGGCCACAATTTCCAACAGTCTGTTACCAGCATTTGGCACTAATCCTGATGAAGGTTACTTCAACCTCAAAAAATATACCATTGCTCCTTATGATCGAAGATATCGATTGTGGCAAACGTTCCTAGTGGCATTGGTGGTGTATTCTGCATGGGCATCTCCATTTGAGTTAGCTTTCAGAGAGATGTCAATTGGGTCGCTGTTGATAGCTGATCTTTTTGTGGATGCTTTCTTTGCATTTGACATAATCCTAACTTTCTTTGTGGCTTACTTGGATACATCAACTTATTTCCTTGTTGATGACCATAAGAAGATTGCTATCAGGTATGTCAAACATTTATACTTTCCCATGGATCTAGCTTCAACTCTGCCATTTCAGCAGATGTATCAACTTATAGCCGGCAAATCACACGATAGAGGGGAAGTCTTTGGTTTTCTTAACATGCTTAGACTCTGGCGATTGAGACGTGTTAGCGAGCTCTTCTCAAGGCTAGAGAAAGACATAAGGGTTAGCTACTCATTAACAAGAGTCTGTAAACTTTTATGCGTTACGCTATTTGCAGTGCACTTCACAGGCTGTGTGTATTTTTGGTTGGCCTACCATCACGAATCACCTGAAAATACATGGATTGGGAAGCAGGTAGAGGATTTTAAGCAAAGGAGTGTAGGGTCGGGATATACTTACTCCATGTACTGGTCTATCGTAACCCTTACTACCGTTGGCTATGGAGATTTGCATGCAGAAAATACAACAGAGAAAGTTTTCAATATATTTTACATGTTGTTTAACATCGGCCTCACTGCATATATTATCGGAAACATGACAAATTTGGTGGTTCATAGCTCTGTCCGAACCTTTGCCATGAGGGATGCCTTCAATAAAATATTACAATATGCGAGCAAAAATGGACTCCCGGTAGGATTGAAGGAGCAAATGTTGGCACATACACAACTGAAGTTTAAGACAGCAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTACCTAAAGCAATTAGAGCTGGTATTGCTCAGCATCTTTTTCACAACGTGATTGAAAAAACATATTTATTTAAAGGAGTCTCAGATGATTTTATATCTCAGCTGGTATCAGATATGAAAGCAGAATACTACCCATCAAAGGTTGACATTATCTTGCAAAATGAGATGCCAGCATATTTCTACATTTTGGTATCTGGATCGGTGGATGTTTTGATATACAAGAATGGATCTGAAAAGTTTTTGTTCAAACTAGAACCTGGAAGCATGGTAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTCTCCCAGCTTATACGAATCGATCATCATCATTTCAAGCAGATGGCAAAACCATTTAATGAAGATGGGAAAGCAGTCATCAGCAATTTTACTCAGTTTTTGAAGGGACTAAGAGGCGGGGTTCTGGAAGAAGTACCACTCGTAACAGAATTTCTGAGTGACTTGCCTGAAGAGGTATATCTTTTCCTTAGAGTTTCAATCACTAAAACTTTTAATTGGTCTACTGAAATGCAGAAACATTTTCCTAATGCTCAGATAGAAAAATTTAAATAA | 1650 | 0.3891 | MTIPSLVRRRSSGEIRNLATISNSLLPAFGTNPDEGYFNLKKYTIAPYDRRYRLWQTFLVALVVYSAWASPFELAFREMSIGSLLIADLFVDAFFAFDIILTFFVAYLDTSTYFLVDDHKKIAIRYVKHLYFPMDLASTLPFQQMYQLIAGKSHDRGEVFGFLNMLRLWRLRRVSELFSRLEKDIRVSYSLTRVCKLLCVTLFAVHFTGCVYFWLAYHHESPENTWIGKQVEDFKQRSVGSGYTYSMYWSIVTLTTVGYGDLHAENTTEKVFNIFYMLFNIGLTAYIIGNMTNLVVHSSVRTFAMRDAFNKILQYASKNGLPVGLKEQMLAHTQLKFKTAELQQEEVLQDLPKAIRAGIAQHLFHNVIEKTYLFKGVSDDFISQLVSDMKAEYYPSKVDIILQNEMPAYFYILVSGSVDVLIYKNGSEKFLFKLEPGSMVGEIGVMFNIPQPYTVRSRRLSQLIRIDHHHFKQMAKPFNEDGKAVISNFTQFLKGLRGGVLEEVPLVTEFLSDLPEEVYLFLRVSITKTFNWSTEMQKHFPNAQIEKFK* | 550 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g0601 | 549 | CDD | CAP_ED | 373 | 486 | IPR000595 | - | |
Psa5g0601 | 549 | SMART | cnmp_10 | 373 | 490 | IPR000595 | - | |
Psa5g0601 | 549 | PANTHER | POTASSIUM CHANNEL KAT3 | 22 | 516 | - | - | |
Psa5g0601 | 549 | Gene3D | Jelly Rolls | 338 | 495 | IPR014710 | - | |
Psa5g0601 | 549 | PRINTS | EAG/ELK/ERG potassium channel family signature | 88 | 98 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Psa5g0601 | 549 | PRINTS | EAG/ELK/ERG potassium channel family signature | 99 | 108 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Psa5g0601 | 549 | PRINTS | EAG/ELK/ERG potassium channel family signature | 243 | 260 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Psa5g0601 | 549 | PRINTS | EAG/ELK/ERG potassium channel family signature | 269 | 280 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Psa5g0601 | 549 | PRINTS | EAG/ELK/ERG potassium channel family signature | 287 | 296 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Psa5g0601 | 549 | Pfam | Cyclic nucleotide-binding domain | 395 | 475 | IPR000595 | - | |
Psa5g0601 | 549 | PANTHER | POTASSIUM CHANNEL AKT1 | 22 | 516 | IPR045319 | GO:0005249|GO:0006813 | |
Psa5g0601 | 549 | SUPERFAMILY | Voltage-gated potassium channels | 47 | 295 | - | - | |
Psa5g0601 | 549 | Gene3D | - | 53 | 297 | - | - | |
Psa5g0601 | 549 | Pfam | Ion transport protein | 53 | 297 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Psa5g0601 | 549 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 373 | 492 | IPR000595 | - | |
Psa5g0601 | 549 | SUPERFAMILY | cAMP-binding domain-like | 302 | 492 | IPR018490 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g0601 | Psa-Chr5 | 47966141 | 47973021 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g0601 | 8 | 518 | Ion Channels | AT4G32650 | 62.305 | 0.0 | 633 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g0601 | K21867 | - | gmx:100794620 | 769.615 |