Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0596 ATGTTGTCTTTCTCTTCAATTAATTGTATTGACATAACAAAAATTTTGGGACAAAACCCAGAATTCTCAACTTTCAACAAATACCTAACCGAAACCAAGTTGGCTGAACAAATCAACACTGCTAAAGCCGTTACAATTCTCGCCCTGGATAACACCGATATCGCTTGTCTCTCTGGTAAATCACCCGACGCCGTTAAAACCGTTATTGGAACCCATATTATAACTGATTTCTACGATGAGAAAAAACTCTTTGAAGTCATAGGTAGCCACGCCGAATTAGCTACGCTTTCACCGGCTTCCGGCTTAGCCGCGAAGATCTATGTAGCACTTATTAATGAAGGTGAGGTGGCATTTGGTTCCGCTATTGTTGGTTCAACTTTTGATACCAAGCTTGTTAGAACCGTGACAACTGAAGCTGGAGTCATTTCAGTTCTTCAGGTTACTCAACCTATTGTTAAGGTTGTTGATTCAGCTCCGATGAAGACAGCACCAAAGCTACCTTCTGGTACTGATGGAAAGGTTGCTTCACCCACCACAGATGTGGTGGGTGAGTCACCTAAGAGTGTTGTTGTTGTTGCACCTGCTTCTAATGCTTCTTCCCGTACCATGTTTGGGTTCATTGGTGTTGTTATGACATTTGCTTGCGTTTTTGTCTCATTGGTACACTATCCTTCAAGGCTGAAAAAGGAGTGTCAAGGTTTAACACCTCTTAAGGCGAAGAAAAAGTGCCAAGGTTTATCACCTTACAAGGCGAGGAATGAGTATCCAAGGTTTATCACCTTACAAGGCAAGCGCCAAGGTTTACCACCTTACAAGGCAAGTGCCAAGGTTTACCACCTTACAAGGCAAAAAATCGACTGA 861 0.4262 MLSFSSINCIDITKILGQNPEFSTFNKYLTETKLAEQINTAKAVTILALDNTDIACLSGKSPDAVKTVIGTHIITDFYDEKKLFEVIGSHAELATLSPASGLAAKIYVALINEGEVAFGSAIVGSTFDTKLVRTVTTEAGVISVLQVTQPIVKVVDSAPMKTAPKLPSGTDGKVASPTTDVVGESPKSVVVVAPASNASSRTMFGFIGVVMTFACVFVSLVHYPSRLKKECQGLTPLKAKKKCQGLSPYKARNEYPRFITLQGKRQGLPPYKASAKVYHLTRQKID* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0596 286 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 2 199 - -
Psa5g0596 286 Gene3D FAS1 domain 10 158 IPR036378 -
Psa5g0596 286 ProSiteProfiles FAS1/BIgH3 domain profile. 9 159 IPR000782 -
Psa5g0596 286 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 199 IPR033254 -
Psa5g0596 286 SUPERFAMILY FAS1 domain 15 105 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0596 Psa-Chr5 47649593 47653644 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0596 - - mtr:MTR_3g108760 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0596 5 47649593 47653644 Psa5g0596 5 47649593 47653644 ECH
Psa5g0596 5 47649593 47653644 Psa6g0533 6 17599482 17602281 ECH
Psa4g0425 4 26038112 26041085 Psa5g0596 5 47649593 47653644 ECH