Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa5g0572 | ATGGGATGGGGTTGGGCTGGTGTAATCTGGGTGTACAGTCTAGTGACATATTTCCCTCTTGATATACTCAAATTCGTAATCCGCTATGTTCTAAGTGGCAAAGCTTGGGATAATCTTTTGGAGAACAAGACTGCTTTCACAACAAAGAAAGACTACGGCAAAGAAGAGAGAGAAGCACAGTGGGCAACTGCTCAGAGGACTCTCCATGGTCTTCAGTCACCAGAAACAACCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCTGAGATTGCTGAGCAAGCCAAGAGACGCGCTGAGGTTGCACGGCTTAGGGAGCTTCATACTCTAAAGGGTCACGTCGAATCAGTTGTGAAGCTTAAGGGACTTGACATTGACACTATGCAACAACATTACACTGTTTAA | 408 | 0.4485 | MGWGWAGVIWVYSLVTYFPLDILKFVIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQSPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa5g0572 | 135 | Coils | Coil | 86 | 106 | - | - | |
| Psa5g0572 | 135 | Gene3D | - | 84 | 135 | - | - | |
| Psa5g0572 | 135 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 1 | 117 | - | - | |
| Psa5g0572 | 135 | Gene3D | - | 1 | 30 | - | - | |
| Psa5g0572 | 135 | PANTHER | PLASMA MEMBRANE ATPASE | 1 | 117 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa5g0572 | Psa-Chr5 | 46521550 | 46523478 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa5g0572 | 2 | 135 | Primary Pumps ATPases | AT2G24520 | 85.075 | 1.59e-78 | 243 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa5g0572 | K01535 | - | gmx:547525 | 269.626 |