Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0571 ATGGATGTCTCTGCAGTGACAAACCGGGACTCTGACCTTATAAGTTGTCTGTTGATAAATTTGATTGAGGTTTTTGCTAAGAATGTAGAGAAGGCTTATGTTATCTTCTTGGCAGCGGCTTCTAGGACTGGAATCAGGTGCAATAGATGCTGCAATTGTTGTATGCTTGCTGTCCAAAGGAGACAGAGAACTGCTCTTACCTACATTGACTTGATGATTGGCATCGATCAAGCAAGGTGCTCCAGCAGAGGATGTCAGGAAGAAAGCTCATTCCGTAATGACAAGTTCGCCGAGCGTGGACTCATGCTGCTAGAGGAGGCTGCTCTGTATTGTCTTCTGAACCGGTCTAGTGTTTTATCAGTGCATGCTCACCAGCAGGGCAATTTTCCAAAGGATGAAGAATTATACTATCTATGCTGTGTCATCACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCGTTGATCTGGAAGTTTGATTTTGCACCCTTCATGTGTTGA 501 0.4371 MDVSAVTNRDSDLISCLLINLIEVFAKNVEKAYVIFLAAASRTGIRCNRCCNCCMLAVQRRQRTALTYIDLMIGIDQARCSSRGCQEESSFRNDKFAERGLMLLEEAALYCLLNRSSVLSVHAHQQGNFPKDEELYYLCCVITIRIVFGFMFIALIWKFDFAPFMC* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0571 166 PANTHER PLASMA MEMBRANE ATPASE 136 165 - -
Psa5g0571 166 PANTHER CALCIUM-TRANSPORTING ATPASE 136 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0571 Psa-Chr5 46519333 46521060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0571 142 165 Primary Pumps ATPases AT4G11730 91.667 3.51e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0571 K01535 - fve:101308954 53.5286