Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0570 ATGGGAGGTATCAGTCTTGAAGAGATAAAAAACGAGAACGTTGATCTGGAACGGATTCCGGTGGAGGAAGTGTTTGAGCAGCTGAAATGTTCGAAAGAAGGTTTATCTTCCGACGAAGGAGCCAATCGGCTTCAGGTTTTTGGTCCGAACAAATTGGAAGAGAAAAAGGAGAGCAAGTTTTTGAAGTTTTTGGGGTTTATGTGGAATCCTTTATCATGGGTTATGGAAGCTGCTGCTATTATGGCGATTGCTTTGGCTAATGGAAGTGGAAGACCTCCTGATTGGCAAGATTTCGTTGGTATTATTTCTCTGTTGGTTATTAATTCAACTATCAGTTTCATTGAAGAGAATAATGCTGGAAATGCTGCTGCTGCTCTCATGGCTGGTTTAGCCCCGAAAACAAGGGTTCTCAGAGATGGTCGCTGGTCTAAGAAGATGCTGCAATTTAGTCCCAGTGCACTAATCAGCATTAATTAG 477 0.4235 MGGISLEEIKNENVDLERIPVEEVFEQLKCSKEGLSSDEGANRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGSGRPPDWQDFVGIISLLVINSTISFIEENNAGNAAAALMAGLAPKTRVLRDGRWSKKMLQFSPSALISIN* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0570 158 Gene3D - 66 157 - -
Psa5g0570 158 PANTHER CALCIUM-TRANSPORTING ATPASE 1 157 - -
Psa5g0570 158 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Psa5g0570 158 PANTHER PLASMA MEMBRANE ATPASE 1 157 - -
Psa5g0570 158 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Psa5g0570 158 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 146 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0570 Psa-Chr5 46516531 46519117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0570 4 157 Primary Pumps ATPases AT2G07560 80.000 1.96e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0570 K01535 - aof:109841344 246.514