Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0546 ATGTGCCGCCCACTTTCCCATTTTTATTTTATTTTTCAGAAAATTAAAATAAAAAACAATCGCACGTGTGCACGCACGCGTTCTAAAATTCTATTTATACCCCTGAAGCTCCTAACCTCACTCCCTTTTCCCACTTTCTCTATTCTCACTACAGTTAAGCTTTCTCTCTTCTCCGGCGACGTTATGGCTGCAACAGAATCGAATCTAGACGAGTTTCTCAATCTCGATTACGAACTTCGGTATCCAAGTCTTGCCGATACGGAAGCGTTCATGACCGGCGTTTGCTCCGCCGCCTTCCAAACTCTTTTACCGGATGTGGTAACTTCCTTTTCAACTTGTGGTGGAGTTTCAGATTCTCAAAACCTCACTCCCAAACATTCCACCATCACTGCTACTATTGATTCTCAGTCATCCCTTTATGGCACTGTTGGAAGCCCAGTTTCAGCCAATAAACCAAACAGCAGAGAGAATCACGCCAAAGGAACATCAAGTGGTTCCTCTGATCCTTCCGATGAAGACGATGAATTAGGTCCTTGTGAACAAAGCACTAATCCACTGGATATCAAACGCCTTAGAAGAAAGGTTTCTAATCGCGAATCAGCCAGAAGATCGAGGCGAAGAAAACAAGCTCATTTGTCCGAACTCGAGTCTCAGGTAACTAATTCATTTCATATCTAA 678 0.4322 MCRPLSHFYFIFQKIKIKNNRTCARTRSKILFIPLKLLTSLPFPTFSILTTVKLSLFSGDVMAATESNLDEFLNLDYELRYPSLADTEAFMTGVCSAAFQTLLPDVVTSFSTCGGVSDSQNLTPKHSTITATIDSQSSLYGTVGSPVSANKPNSRENHAKGTSSGSSDPSDEDDELGPCEQSTNPLDIKRLRRKVSNRESARRSRRRKQAHLSELESQVTNSFHI* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0546 225 MobiDBLite consensus disorder prediction 141 166 - -
Psa5g0546 225 MobiDBLite consensus disorder prediction 141 225 - -
Psa5g0546 225 Coils Coil 198 218 - -
Psa5g0546 225 Pfam bZIP transcription factor 188 219 IPR004827 GO:0003700|GO:0006355
Psa5g0546 225 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 219 IPR004827 GO:0003700|GO:0006355
Psa5g0546 225 PANTHER BZIP TRANSCRIPTION FACTOR 62 220 - -
Psa5g0546 225 Gene3D - 188 222 - -
Psa5g0546 225 PANTHER BASIC LEUCINE ZIPPER 63 62 220 - -
Psa5g0546 225 SUPERFAMILY Leucine zipper domain 188 220 IPR046347 GO:0003700|GO:0006355
Psa5g0546 225 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0546 Psa-Chr5 44219452 44224386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0546 134 219 bZIP Transcription Factor Family AT5G24800 51.087 9.15e-17 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa5g0546 bZIP_1 3.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0546 K25784 - lja:Lj1g3v2035100.1 179.874