Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0528 ATGTGTTTTGGAAAAGTACAATTCACTGTAAATGTCACCAACGAGGAAGTTGTGGCTGCTGCACTTCCCATGCAAGAACATTGGCTGCCACTATCAAACCTTGATTTGATTCTTCCACCTGTTGATGTTGGTGTGTTCTTTTGCTACAATAATCCTATGATTAGTATTGGCACACACAGTAACATTGTAGCGTGTTTGAAACATTCCTTAGCTGAGGCTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTTGTTGCTAACTCCATGGGTGAACCTGAGATTCTTTGCAACAATAGAGGAGTGGATTTTGTTGAAGCTTTTGCCGATGTCGAGTTACAATCTCTTAATTTGTATAATCCAGATGAAAGCGTGGAAGGAAAACTTGTTCCAGAGAAAAAACATGGTGTGTTTGCTGTTCAGGCTACTTGGATGAAATGCGGCGGGTTAGTAGTCGCGTGCAAATTTGACCATCGCATAGCGGACGCCTATTCCGCAAACATGTTCCTTGTATCGTGGGCCGAGATAGCTCGGCCGCACGATAACATGTCATTGATCCCGACTACGCAACCTTGTTTTCGTCGGTCCCTATTGACCCCGCGTCGTCCACCTTCAATCCATCCTTCACTCTATGACATGTATGTCCCCGTCTCCGAGCTACCTCCTCCACCCGAACCCGAGTTCGAATCCGAACTAACGGACCCAATAATAAGTCGGATATACTATGTAACAAGTGAAGAACTCAACAACATGCAATCACTAGCCAACTCAAACAATAATAGTAACACTAAGCGCTCAAAACTTGAGTCCTTTTCCGCTTTCCTATGGAAGATGGTTGCTGAAGCAGCTTCAACCGATAGTGATAATAAGAACATTGTTGCAAAAATGGGACTAGTTGTTGATGGAAGAAGGAGACTAAGCAATGGTGACAAAAACAAGGAAGAGATTATGAGTTCATATTTCGGGAACGTGCTTTCAATTCCCTACGGTGGTAAATCAGCAGAAGAGCTTATTGAAAAGCCATTAAGTTGGGTGACAAACCAAGTTCATGACTTTTTGGAGGCGGCGGTGACGGAGGAGCATTTCTTAGGACTTATTGATTGGGTTGAAGAGCATCGACCGGTTCCGGGGCTAGCAAGGATTTACTGCGGTGGTACCGGCGGAGAAGACGGGCCGACATTTGTGGTGTCTTCCGGGCAGCGGTTTCCGGAGTCGAAGATAGACTTTGGATGGGGGAAGCCTGTGTTTGGATCTTACCATTTTCCATGGGGTGGTAGTGCTGGATATGTTATGCCAATGCCAAGTCCTAAAAGGAATGGTGACTGGTTGATCTACATGCATCTTGCTAAGGGACATTTGGAATTCATGGAAGACCAAGCTCCTCATTTCTTTAGACCAGTCTCTTGGGATTACCTTCTCAATTGA 1422 0.4487 MCFGKVQFTVNVTNEEVVAAALPMQEHWLPLSNLDLILPPVDVGVFFCYNNPMISIGTHSNIVACLKHSLAEALVSYYAFAGEVVANSMGEPEILCNNRGVDFVEAFADVELQSLNLYNPDESVEGKLVPEKKHGVFAVQATWMKCGGLVVACKFDHRIADAYSANMFLVSWAEIARPHDNMSLIPTTQPCFRRSLLTPRRPPSIHPSLYDMYVPVSELPPPPEPEFESELTDPIISRIYYVTSEELNNMQSLANSNNNSNTKRSKLESFSAFLWKMVAEAASTDSDNKNIVAKMGLVVDGRRRLSNGDKNKEEIMSSYFGNVLSIPYGGKSAEELIEKPLSWVTNQVHDFLEAAVTEEHFLGLIDWVEEHRPVPGLARIYCGGTGGEDGPTFVVSSGQRFPESKIDFGWGKPVFGSYHFPWGGSAGYVMPMPSPKRNGDWLIYMHLAKGHLEFMEDQAPHFFRPVSWDYLLN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0528 473 Gene3D - 221 457 IPR023213 -
Psa5g0528 473 Gene3D - 9 211 IPR023213 -
Psa5g0528 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 467 - -
Psa5g0528 473 Pfam Transferase family 9 459 - -
Psa5g0528 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0528 Psa-Chr5 41407374 41409329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0528 10 456 Monolignol Biosynthesis Gene Families AT5G48930 26.419 7.45e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0528 - - cam:101501659 753.051