Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0523 ATGGAGTGGGTTGTCGGCGGCAAGTTTAAGATTGGTCGCAAAATCGGAAGCGGTTCGTTTGGTGAAATTTTCGTCGCTTCGGATATGGATAACTCTGAGATCGTAGCTGTTAAATTGGAGAAGAAGAATACAAGGCATCCACAACTATTGCAAGAGGCCAAATTGTACAGTATTCTTCAAGGAGAAAGTGGTATTCCAAATATGAAATGGTGTGGTACTGATGGAGACCATAATGTTCTGGTCATGGATCTTCTAGGACGTAGTCTGGAAGATCTTTTTGTCTTCTGTGGGAACAAGCTTTCTTTAAAAGCAGTTTTGATGTTGGCCGACCAGATGCTTTCGAGAATAGAATACATGCATTCCAAGGGATTTTTACATAGAGACATTAAACCAGATAACTTCCTAATGGGTATTAGGAGAAAATCAAGTCAGGTTTATATTATTGATTTCGGACTAGCAAAAAGATATCGGGACCCCAAAACAAAAAAGCATATTGCTTACAGAGAGAAGAAAAATTTAACAGGGACTGCACGATATGCAAGTTGCAATACTCACTTAGGAATTGAGCAAAGTCGCCGTGATGATTTGGAATCTATTGGCTATGTTCTTATGTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGATTGAAAGCTGTCACCAAAGAGGAAAAATATAACAAGATTCGGGAGAAGAAGTTATCAACTCCCATTGAGACGCTCTGCGAATCATATCCTGTGGAGTTCGCTTCTTACTTTCATTATTGTCGCTCTTTGGCATTTGATCAAGATCCAGATTATGGATTCTTAAAGCGTCTGTTTCGTGATTTGTTCACTTGTGAAGGATATGAGTATGACAATTTATTCGACTGGACCATCCTAAGAAATCGGCAGGTGCAACAGACAAGGAGACAGAATCAATCATCTACTTCAGATGCTGTGCCTAGTGCTGTTCCTAGCAGTATGGAACCATTGGCTATGGAAAAGCGCACAGGAATCAGTAATTCTCCTCAATTTCCTGTAACAAAACTGCTAACGAATCTTGATCGTTCAAACACGCGTGTGCATCCTAAGCCATCCAATGTTAAGAAACCGAATGCCAGGAATCATACTGAAAAACATAATGTAAACAATGGTTCATCCACTTCATCTGCCTTGCAAAAATCAACTACAGGAGTTGTCTCCAAGCCTGAAAGGTCCACAGGAACCTCAAACCTAAGTCGTGTATTTGGTAGTAACTCCCATGTTTCAAGCAGCTGGATGCCTTCATTGCGACGGATTTCTTCAACCAAATAA 1293 0.406 MEWVVGGKFKIGRKIGSGSFGEIFVASDMDNSEIVAVKLEKKNTRHPQLLQEAKLYSILQGESGIPNMKWCGTDGDHNVLVMDLLGRSLEDLFVFCGNKLSLKAVLMLADQMLSRIEYMHSKGFLHRDIKPDNFLMGIRRKSSQVYIIDFGLAKRYRDPKTKKHIAYREKKNLTGTARYASCNTHLGIEQSRRDDLESIGYVLMYFLRGSLPWQGLKAVTKEEKYNKIREKKLSTPIETLCESYPVEFASYFHYCRSLAFDQDPDYGFLKRLFRDLFTCEGYEYDNLFDWTILRNRQVQQTRRQNQSSTSDAVPSAVPSSMEPLAMEKRTGISNSPQFPVTKLLTNLDRSNTRVHPKPSNVKKPNARNHTEKHNVNNGSSTSSALQKSTTGVVSKPERSTGTSNLSRVFGSNSHVSSSWMPSLRRISSTK* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0523 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Psa5g0523 430 MobiDBLite consensus disorder prediction 345 430 - -
Psa5g0523 430 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Psa5g0523 430 SMART serkin_6 9 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0523 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Psa5g0523 430 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0523 430 PANTHER CASEIN KINASE-RELATED 1 414 - -
Psa5g0523 430 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Psa5g0523 430 Pfam Protein kinase domain 10 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0523 430 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 414 - -
Psa5g0523 430 MobiDBLite consensus disorder prediction 371 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0523 Psa-Chr5 41296123 41303122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0523 6 213 EF-hand Containing Proteins AT3G50530 26.667 1.49e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Psa5g0523 Pkinase 3.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0523 K08960 K08959 gmx:100792736 657.136