Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0521 ATGATCTCTTCCTTAATGTTACCATCTGCTACAACATTAAGACCTTGTTGTAGCTGCAGCATCATTCCCTCATCATCATCATCTTCATCTTCACGAAGACTCACTCTCTTTCATCTTCTCACCACCGGTGCTATTGTTTTCTGGTGCTGCTGCTGCATTTGGTTATTCCTTTCCTTACTAGTTCTTCCACCACAATCACAATTCTTCGGTGCAAAACTATCACAAGCTAATGCTGCTCAAAACTTGTTTGGTTGGGTCCAAAATGATGATAGAAGATTTCTACATGTTGTTTACAGTGTTGCAGATTTGGACAAGACTATAAAGTTCTACACTGAATGTCTTGGCATGAAGCTTTTGAGAAAACGCAATATACCGGAAGATAAATATTCGAATGCTTTTCTTGGATATGGACCTGAAGATTCCAATTTTACAGTGGAACTTACTTATAATTATGGTGTAGATAAGTATGACATTGGAACTGGTTTTGGTCATTTTGGTGTTGTAGCTCAAGATGTTGCCAAGACAGTTGATATTGTAAAGGCGAAAGGGGGCAAGGTTACCAGGGAGCCGGGGCGTGTCAAAGACGGCTCTATAGTTAGTGCTTCCGTTGAAGATCCTAGTGGTTATCGGTTTGAGCTTTTGGAGAGAAGACTTACTCGTGAACCGTTGTGCCAAGTGATGCTTCGAGTAGGCGATCTTGATCGTGTCATAGCCTTCTATGAAAAAGCTGTTGGAATGAAACTTCTCCGCAAGATAGACAACCCTGAGGAAAAGAACACAGTAGCCGTGTTAGGATACGGTCCTGAAGCTAATGGTCCAGTTCTAGAACTGACGTATAACTACGGCGTCACTAATTATGACAAAGGAAATGGTTATACACAGATCGCAATAGGCACGAATGATGTCTATAAGACAGCAGAAGCAATCAAGTTATATGGAGGTAAGATTATCCGTGAACCTGGACCTTTACCAGGTATCAACACCAAGATTGTCGTTTGCTTAGACCCCGATGGTTGGAAATTGGTATTTGTTGATAATGTCGATTTTCTGAAGGAATTAGAGTGA 1065 0.4113 MISSLMLPSATTLRPCCSCSIIPSSSSSSSSRRLTLFHLLTTGAIVFWCCCCIWLFLSLLVLPPQSQFFGAKLSQANAAQNLFGWVQNDDRRFLHVVYSVADLDKTIKFYTECLGMKLLRKRNIPEDKYSNAFLGYGPEDSNFTVELTYNYGVDKYDIGTGFGHFGVVAQDVAKTVDIVKAKGGKVTREPGRVKDGSIVSASVEDPSGYRFELLERRLTREPLCQVMLRVGDLDRVIAFYEKAVGMKLLRKIDNPEEKNTVAVLGYGPEANGPVLELTYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLYGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0521 354 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 225 342 IPR004360 -
Psa5g0521 354 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 93 213 IPR004360 -
Psa5g0521 354 Gene3D - 68 217 IPR029068 -
Psa5g0521 354 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 223 347 IPR029068 -
Psa5g0521 354 ProSitePatterns Glyoxalase I signature 1. 95 116 IPR018146 GO:0004462|GO:0046872
Psa5g0521 354 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 92 216 IPR037523 -
Psa5g0521 354 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 71 354 - -
Psa5g0521 354 Gene3D - 219 354 IPR029068 -
Psa5g0521 354 PANTHER LACTOYLGLUTATHIONE LYASE 71 354 - -
Psa5g0521 354 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 91 216 IPR029068 -
Psa5g0521 354 TIGRFAM glyox_I: lactoylglutathione lyase 81 225 IPR004361 GO:0004462|GO:0046872
Psa5g0521 354 TIGRFAM glyox_I: lactoylglutathione lyase 223 347 IPR004361 GO:0004462|GO:0046872
Psa5g0521 354 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 222 346 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0521 Psa-Chr5 41285849 41287835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0521 223 345 Calmodulin-binding Proteins AT1G08110 26.351 2.53e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0521 K01759 - mtr:MTR_3g110185 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0521 5 41285849 41287835 Psa5g0521 5 41285849 41287835 ECH