Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0434 ATGTCTGAGCTACCCTTCTTTATGTTGAAATTTCCCTGTTATTTGTTTCTCTTGCTAACCTTCATAATACCCTTTAAAGTAATTTCACAACCTACAAGTTCCGAAGAAACCATACTTCTCACTCTTAAACGTCAACTTGGTGATCCGCCGTCGCTCCAATCATGGAAACCGTCACCGTCTTCGCCGTGCGGATGGCCGGAGATCAATTGCACCGGTGGATCCGTCACGGAGCTTCTCCTCCCGAACAAAGACATCACCATACAGGAACTCCCTTCAACAATCTGCAACCTCAAGAACCTCACTAAACTTGACCTCTCCAACAACTCCATCGCTGGGGAGTTTCCGACGTGGATGTACAACTGCTCCAACCTCCGGTACCTCGACCTCTCCCAGAACTACTTCGCCGGAAAAATCTCTGACGACATCGGTAACCTCAAAACACTCACGTACCTCAACCTCGCTGGCAACAGCTTCACCGGTGATATCCCGGCGGGTATCGGAAAACTCTCGAACCTTCAAACACTTTACCTCTTTCAAAACAACTTCAACGGAACCATTCCAAGGGAAATCGGAGACTTATCCAATCTCGAAACTCTCGGTTTAGCTGATAACTTTCTACTCAAACCAATGGCAATTCCGTTCGAGTTCGGAAAAATGAAGAACTTAAAATTCATGTGGATATCAAAGTGTAACTTGATCGGAACCATTCCAGAAAGCTTCATGAATCTCACGAATCTCGAACACTTGGATTTATCAACCAACAATTTAACAGGAAACATACCTAGAAGTTTATTCTCGCTAAAGAAATTGACCTATTTGTACCTTTACCTCAACAGGTTTATTGGTGTGATACCTGATTCGGTTCAGGCTTTGAATTTAACAGAAATCGATTTGTCGATGAACAATTTAACTGGTTCAATACCGAAAGCATTTGGTAAGTTGCAGAATTTGACTGTTCTGCAATTGTTTTCAAATCAGTTATCTGGTGAGATACCTAGCAGTTTAGGGCTAATTCCAAGTTTGAGGAAATTTAAGGTTTTTGAAAATAAGTTGAATGGAACAGTACCTTCAGAATTTGGAAGGTATTCAAAGCTTGTGATTTTTGAAGTTGGTGAAAATCAACTCATTGGTGGGTTACCAGAACATTTGTGTGAAGGTGGTGTTTTGTTGGGGGTAACTGCTTTTTTGAATAATCTCAGTGGAAACTTGCCAAATTGGTTTGAGAATTGTGTTTCTCTTACCACTGTTAAGCTTTACAGTAACAGATTTTCAGGGGAAGTTCCTTTGGGTTTGTGGAGTTTGACGAAATTGTCGACGTTGATGTTAAGTGATAACTTGTTTTCCGGTGAACTTCCAAGTAAATTATCATGGAACATGTCTAGACTTGAGATTAGAAACAATAACTTTTCAGGTCAGATATCTCTTGGAGTTTCTTCTGCTTTAAATTTGGTAGTTTTTGATGCAGGAAACAACTTGTTTTCTGGTGAGGTTCCAAGGGAATTAACGGGTTTATCGCAGCTCATTACTCTCGTGCTTGATGGTAATCAACTCTCTGGAACACTTCCGTCTGAAATAATATCATGGCGATCACTTAATACTCTAAATATCTCGAGAAACAAAATTACGGGTCGAATACCTGTAGCTTTGTCTTCTCTTCCTAGCCTTGACTACTTGGATTTATCTGAAAATAACATAACCGGTGAAATCCCGCCTCAGCTTGTGAATTTGAAGCTTATTTTTCTTAACTTGTCTTCCAACAAGCTTACGGGGAACATCCCTGATCAGTTTGAGAATCTTGCATATGAAAACAGTTTCTTGAACAATCCTCAACTATGTGCTCATAATGAAAATTTCAACCTTTCAAGCTGCTTGACAAAAACCACACCACAACACTTCAGAAATCATTCGTCTTTGAAATCAAAACTCATTGCTCTGATTCTTGTTGTTACCGTTGCTGTGTTGCTGGCCACGGCTTCTTTGGCCTTCTGCGCATTGAAAAAGCATTGTGGTAAAAAGCACTGTGGGCGTAAGCTTTCAACATGGAGGCTTACATCATTCCAGAGGTTTGATCTCACAGAAATAAATATCTTCTCAAGCTTGACAGATAATAACCTCATAGGAAGTGGAGGGTTTGGAAAAGTTTACCGAGTAGCTTCAACTCGTCCCGGTGAGTACATTGCAGTGAAGAAGATTTGGAATGTCAAGGATGTGGATGACAAACTGGATAAAGAATTCATGGCTGAGGTTGAAATTCTAGGCAATATTAGGCATTCCAATATAGTGAAGCTTTTGTGTTGTTATTCAAGTGAAAACTCTAAACTTCTTGTTTATGAATACATGGAAAATCATAGCTTGGACAAATGGCTTCATAAAAAGAAGAAAACATTAGTCTCTGGGTTGAGCTCACACACTGAAAATCAAATGGTGTTGAGTTGGCCTAAAAGGTCGAACATTGCCATCGGTGCTGCACAAGGCCTGTGTTACATGCATCATGAATGTTCAGTGCCAATCATTCACAGAGATGTCAAATCGAGCAATATATTGCTTGACTCTAAGTTCAAGGCAAGTATAGCAGATTTTGGGCTTGCCAAGATGTTGGCAAAGAATGGGGAACCATACACCATGTCTGTTCTAGCAGGGTCTTTCGGCTACATTCCACCAGAATATGCATATTCTACCAGGATTGATGAGAAAGTCGATGTGTATAGCTTTGGAGTTGTACTACTAGAGCTTGTGACGGGAAGGGAGCCTAATTATGGAGGTGAGAATGCATGCAGCCTGGTTGATTGGGCATGGCGGCATTGTGATGAAGGAAAATGTATCCCTGATGCCTTTGATGAGGATATCAGAGAAACACACTATGCAGCAGAGATGACTAACGTCTTCAAATTAGGTCTCATGTGCACAAGTACATCACCATCCACTAGGCCTTCAACAAAGGAGATTTTGCAAGTTCTTCAGCAGTGTTGTTCTTCAAGTTCTGCACATAGAAGAGTGGCAACTGAATTTGAGATCACTCCGCTTCTCGGCAACACAACTTACATTTCTAGTTACAAGGATGGTAGGACTGTGATTGAAAATGAAGAAAGCTGCTTATACAGTGTGTAA 3108 0.408 MSELPFFMLKFPCYLFLLLTFIIPFKVISQPTSSEETILLTLKRQLGDPPSLQSWKPSPSSPCGWPEINCTGGSVTELLLPNKDITIQELPSTICNLKNLTKLDLSNNSIAGEFPTWMYNCSNLRYLDLSQNYFAGKISDDIGNLKTLTYLNLAGNSFTGDIPAGIGKLSNLQTLYLFQNNFNGTIPREIGDLSNLETLGLADNFLLKPMAIPFEFGKMKNLKFMWISKCNLIGTIPESFMNLTNLEHLDLSTNNLTGNIPRSLFSLKKLTYLYLYLNRFIGVIPDSVQALNLTEIDLSMNNLTGSIPKAFGKLQNLTVLQLFSNQLSGEIPSSLGLIPSLRKFKVFENKLNGTVPSEFGRYSKLVIFEVGENQLIGGLPEHLCEGGVLLGVTAFLNNLSGNLPNWFENCVSLTTVKLYSNRFSGEVPLGLWSLTKLSTLMLSDNLFSGELPSKLSWNMSRLEIRNNNFSGQISLGVSSALNLVVFDAGNNLFSGEVPRELTGLSQLITLVLDGNQLSGTLPSEIISWRSLNTLNISRNKITGRIPVALSSLPSLDYLDLSENNITGEIPPQLVNLKLIFLNLSSNKLTGNIPDQFENLAYENSFLNNPQLCAHNENFNLSSCLTKTTPQHFRNHSSLKSKLIALILVVTVAVLLATASLAFCALKKHCGKKHCGRKLSTWRLTSFQRFDLTEINIFSSLTDNNLIGSGGFGKVYRVASTRPGEYIAVKKIWNVKDVDDKLDKEFMAEVEILGNIRHSNIVKLLCCYSSENSKLLVYEYMENHSLDKWLHKKKKTLVSGLSSHTENQMVLSWPKRSNIAIGAAQGLCYMHHECSVPIIHRDVKSSNILLDSKFKASIADFGLAKMLAKNGEPYTMSVLAGSFGYIPPEYAYSTRIDEKVDVYSFGVVLLELVTGREPNYGGENACSLVDWAWRHCDEGKCIPDAFDEDIRETHYAAEMTNVFKLGLMCTSTSPSTRPSTKEILQVLQQCCSSSSAHRRVATEFEITPLLGNTTYISSYKDGRTVIENEESCLYSV* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0434 1035 Gene3D Ribonuclease Inhibitor 392 632 IPR032675 -
Psa5g0434 1035 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 16 1002 - -
Psa5g0434 1035 ProSitePatterns Protein kinases ATP-binding region signature. 706 730 IPR017441 GO:0005524
Psa5g0434 1035 SUPERFAMILY L domain-like 292 590 - -
Psa5g0434 1035 Pfam Leucine rich repeat 528 565 IPR001611 GO:0005515
Psa5g0434 1035 Pfam Leucine rich repeat 227 279 IPR001611 GO:0005515
Psa5g0434 1035 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Psa5g0434 1035 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Psa5g0434 1035 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 16 1002 - -
Psa5g0434 1035 SMART serkin_6 700 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0434 1035 Gene3D Ribonuclease Inhibitor 32 184 IPR032675 -
Psa5g0434 1035 Gene3D Ribonuclease Inhibitor 185 290 IPR032675 -
Psa5g0434 1035 Gene3D Ribonuclease Inhibitor 291 388 IPR032675 -
Psa5g0434 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Psa5g0434 1035 SUPERFAMILY L domain-like 37 380 - -
Psa5g0434 1035 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Psa5g0434 1035 Gene3D Phosphorylase Kinase; domain 1 683 779 - -
Psa5g0434 1035 ProSiteProfiles Leucine-rich repeat profile. 245 268 IPR001611 GO:0005515
Psa5g0434 1035 ProSiteProfiles Protein kinase domain profile. 700 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0434 1035 Pfam Protein kinase domain 702 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0434 1035 PRINTS Leucine-rich repeat signature 100 113 - -
Psa5g0434 1035 PRINTS Leucine-rich repeat signature 243 256 - -
Psa5g0434 1035 ProSiteProfiles Leucine-rich repeat profile. 554 577 IPR001611 GO:0005515
Psa5g0434 1035 SUPERFAMILY Protein kinase-like (PK-like) 692 986 IPR011009 -
Psa5g0434 1035 Gene3D Transferase(Phosphotransferase) domain 1 780 1006 - -
Psa5g0434 1035 SMART LRR_typ_2 504 528 IPR003591 -
Psa5g0434 1035 SMART LRR_typ_2 97 121 IPR003591 -
Psa5g0434 1035 SMART LRR_typ_2 169 193 IPR003591 -
Psa5g0434 1035 SMART LRR_typ_2 434 458 IPR003591 -
Psa5g0434 1035 SMART LRR_typ_2 314 338 IPR003591 -
Psa5g0434 1035 SMART LRR_typ_2 552 576 IPR003591 -
Psa5g0434 1035 SMART LRR_typ_2 243 267 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0434 Psa-Chr5 35492762 35495945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0434 23 1009 Receptor kinase-like Gene Family AT5G25930 55.051 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa5g0434 Pkinase 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0434 K00924 - adu:107461025 1380.16