Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0427 ATGCCGAATCCCGACTCTTCCCGTCAACCCCACCGCTCCAAAACTCGTCCCTCATCTTCATCGGTTCGATCCAAACCTCGCCCTAAAGACAGAGTTCCGCTCACCAAGCTACTCCGAGTAGCGTCAGTTGCCGGTGGGATTCAGTTCGGATGGGCTTTGCAGTTATCTCTTCTAACGCCCTATGTTCAGCAGCTCGGAATCCCGCATGCGTGGGCCAGTATTATATGGCTCTGCGGCCCGCTTTCGGGGCTTATCGTTCAGCCGTTGGTTGGCCATTTGAGTGATCGGTGCACCAGTCGATTCGGCCGGAGGAGACCGTTTATCTTAGGCGGAGCTATTTCGATTGCTTTGTCTGTTCTCATCATTGGTCATGCTGCGGATTTGGGATGGAAGTTTGGTGATACCAAGGAACATCGGCGGTCCGCCGTCGCCTTTTTCGTGTTCGGGTTTTGGATTTTGGATGTTGCTAATAATGTCACTCAAGGTCCTTGTAGAGCATTGCTCGGTGATCTAACCGGTAAGGATCATCGAAGGACACGAGTCGCAAATGCTTATTTTTCCCTATTTATGGCTATTGGTAACATTCTTGGATATGCAACTGGATCATACAGTGGTTGGTACAGGGTCTTTCCTTTCACACTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTGGACATTGTTTTCATGCTCATCACCACCTATATCAGTATCACGTCAGCTAATGAAGTGCCTCTTGGGTCAAGTGGGGAACCCGATGCTGAAGCAGAAGGGGAGTCAGGTGGTAGTGCGGAAGAAGCTTTTTTATGGGAACTATTTGGGACATTCAAATATTTTTCAAAGCCTATATGGATAGTATTGTCTGTTACTGCTCTAACATGGGTTGGATGGTTTCCATTTCTTCTATTCGATACTGATTGGATGGGCCGAGAAATTTATGGCGGTGAGCCAAATGAAGGCACTAATTATGATTCCGGAGTTAGAATGGGGGCACTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAGTAACATCATTACTCATGGAGAAGCTATGCAGGAAGCGGGGGGCTGGGTTTGTGTGGGGAATCGCAAATATCCTAATGGCAGTCTGCTTTGTAGCAATGCTTGTTTTAACCTATGTGGCAAATGACATTGGTTATTTAGGAAAAGATCTACCACCCACTAGCATCGTGATAGCTGCACTGACAATCTTTACCGTTCTCGGGTTTCCATTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATTCAGCCATTGGGGCTCGGCCAAGGATTGTCAATGGGAGTTCTAAATCTTGCAATAGTGTTCCCACAGATGATAGTGTCCTTAGGAAGTGGACCATGGGATCAGTTATTTGGCGGAGGAAACTCTCCGGCGTTTGCTGTGGCAGCTATTGCAGCTCTTGTCAGTGGAGGCATAGCTGTCTTTGCTATTCCCCGAACTGGTTCTCAAAAGCCTAGAAACCCAGTATGA 1524 0.4692 MPNPDSSRQPHRSKTRPSSSSVRSKPRPKDRVPLTKLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLIVQPLVGHLSDRCTSRFGRRRPFILGGAISIALSVLIIGHAADLGWKFGDTKEHRRSAVAFFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGSYSGWYRVFPFTLTPACNISCANLKSAFFLDIVFMLITTYISITSANEVPLGSSGEPDAEAEGESGGSAEEAFLWELFGTFKYFSKPIWIVLSVTALTWVGWFPFLLFDTDWMGREIYGGEPNEGTNYDSGVRMGALGLLLNSVVLGVTSLLMEKLCRKRGAGFVWGIANILMAVCFVAMLVLTYVANDIGYLGKDLPPTSIVIAALTIFTVLGFPLAITYSVPYALISTHIQPLGLGQGLSMGVLNLAIVFPQMIVSLGSGPWDQLFGGGNSPAFAVAAIAALVSGGIAVFAIPRTGSQKPRNPV* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0427 507 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 9 505 - -
Psa5g0427 507 MobiDBLite consensus disorder prediction 1 30 - -
Psa5g0427 507 Gene3D MFS general substrate transporter like domains 285 503 IPR036259 -
Psa5g0427 507 Gene3D MFS general substrate transporter like domains 35 249 IPR036259 -
Psa5g0427 507 Pfam MFS/sugar transport protein 52 198 - -
Psa5g0427 507 PANTHER SUGAR TRANSPORTER 9 505 - -
Psa5g0427 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 32 498 IPR005989 GO:0005887|GO:0008515|GO:0015770
Psa5g0427 507 MobiDBLite consensus disorder prediction 1 22 - -
Psa5g0427 507 SUPERFAMILY MFS general substrate transporter 32 500 IPR036259 -
Psa5g0427 507 CDD MFS_SLC45_SUC 37 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0427 Psa-Chr5 35145751 35154555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0427 1 503 Sucrose Transporter Gene Family AT1G09960 67.059 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0427 K15378 - gmx:100787939 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0427 5 35145751 35154555 Psa5g0427 5 35145751 35154555 ECH