Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0385 ATGCTTTCCCAATTAGTAAAGGAACATTCTTATATGTGTTACCATGTTGGTCTCATATTGGTGTCTTTATCATGTTTTAAAATGTTGGCACTTTGGTGCAAAAACAACAAGTCTAGTAGTGTTGGAAGTCCTCCAGGAAATAGAGGACTACCCTTCATAGGAGAGACACTGCATTTCATGGCTGCCATTAATAGTACTAAAGGAGTCTACGAATTCGTTCGACTTCGCCGCCTCCGATATGGAAATTGCTTCAAGACCAAGTTATTCGGAGAAACACATGTATTTATTTCGAGTAAGGATTCAGCAAAATCGATTTTAAGAAACGAAGGAGGGAAGTTCTCAAAGAAGTACATAAAGTCGATCTCCAAGCTCTTGGGTCCGGATAGTTTGCTGTGTGCAGCTGAGCAGCATCACAAACTCATTCGAAGCCGTCTTGTCAGTTTGTTCTCACCTCATTCTTTGTCTTCCTTTGTTCAACTCTTCGATCGGCTTGTAGTCGAAGCAACAAGTACCTGGACATGTGGAACCCTTCTCATCATACAAGATGAAGCACTCAAGCTAGCTTGTAAGGCAATGTGCAAGATGCTGATAAGCATAGAGAATGGTGATGAACTAATGGTGATGCAAAAGAGCGTTACTTGTGTGTCTGAAGCAATGCTTGCATTGCCTTTGAGGTTACCATGGACCAGATTCTACAAAGGCCTTCAGGCCCGAAAACGAATTATGGACATATTGGAGAAAGTTATCAGTGAAAGAAGACGCGAAATCGCAACTTGCCATGTAGATTTTCTTCAGCAACTTTTGGCAAATGATGATAAAAAATTAGAAAAAGATGAAGTTATAACAAGGCTAACAGATGAAGAGATCAAAGATAATATCTTAACTATGATTATTGCTGGACAAGACACTATAGCAATTGCAATAACATGGATGATCAAATTTGTGGATGAGAATCAAGAGGTTCTTAATGAGCTTAAGAAGGAACAAGTTGAGATTGAGAAAAAATATAGAGGAAGAGTGAATCTTACACTAGAGACTCTTTCTGAGATGCAATATGCTTCCAAGGTGGTGAAAGAAGCATTAAGGATGGCATCTGTAGTGCAATGGTTGCCTAGAGTAGCACTCGAGGACTGCGAAATCGAAGGATTTGAGATCAAGAAAGGTTGGAACATTAACATTGATGCTAGATCAATACATCATGATCCAAGTGTTCATAGCGACCCGAATGTGTTCAAGCCTTCAAGATTTCCGAGTGAGTCAAAGCCAAACAGCTTCTTAGCTTTTGGAGTTGGAGGAAGAATGTGTCTTGGGAAGAACATGGCGGAGGGAATGATGTTGGTGTTTCTTCATCGTTTCGTTACTCGTTTCAAGTGGAAGGTGATTGATTCGGACTCGAGTATTCAGAAATCGGCACTTTTTAATAAACTTAAGAGTGGTTGTCCGGTGCGTTTGATAAATGTGAAGGAGGAAGAATGA 1476 0.4018 MLSQLVKEHSYMCYHVGLILVSLSCFKMLALWCKNNKSSSVGSPPGNRGLPFIGETLHFMAAINSTKGVYEFVRLRRLRYGNCFKTKLFGETHVFISSKDSAKSILRNEGGKFSKKYIKSISKLLGPDSLLCAAEQHHKLIRSRLVSLFSPHSLSSFVQLFDRLVVEATSTWTCGTLLIIQDEALKLACKAMCKMLISIENGDELMVMQKSVTCVSEAMLALPLRLPWTRFYKGLQARKRIMDILEKVISERRREIATCHVDFLQQLLANDDKKLEKDEVITRLTDEEIKDNILTMIIAGQDTIAIAITWMIKFVDENQEVLNELKKEQVEIEKKYRGRVNLTLETLSEMQYASKVVKEALRMASVVQWLPRVALEDCEIEGFEIKKGWNINIDARSIHHDPSVHSDPNVFKPSRFPSESKPNSFLAFGVGGRMCLGKNMAEGMMLVFLHRFVTRFKWKVIDSDSSIQKSALFNKLKSGCPVRLINVKEEE* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0385 491 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 15 487 - -
Psa5g0385 491 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 Gene3D Cytochrome P450 33 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 Coils Coil 315 335 - -
Psa5g0385 491 SUPERFAMILY Cytochrome P450 41 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Psa5g0385 491 PANTHER CYTOCHROME P450 26 15 487 - -
Psa5g0385 491 Pfam Cytochrome P450 44 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa5g0385 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0385 Psa-Chr5 30865179 30868179 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0385 11 458 Cytochrome P450 AT1G19630 56.319 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0385 - - lang:109327951 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0385 5 30865179 30868179 Psa5g0385 5 30865179 30868179 ECH