Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0374 ATGTCTAAATCAAAGGAACTCCCTAATTGTACCTATCCATGTGAACCCGTCACTAAAATTCCACCAAGTGCTCCAACGCCAAAACACTCTCTCTATCTTTCCAATCTCGATGACCAAAAGTTTCTTAGATTTTCAATCAAGTATTTATACATTTTCAAGAAATCAGTGAACTTGAATAACTTGAAATCTTCTCTGTCTAGAGTTTTAGTGGATTATTACCCCTTAGCAGGAAGGTTGAGAAGATGTTCCTCTAGTTTGGACGATGATATTGATGATGAGAAGAAGCTTGAGGTGGATTGCAATGGAAAAGGTGCTTTGTTTGTGGAAGCTTTCATGGATATTACTGCAGATGAGTTAGTTGAACAGTCAAAGCTTCCGAACAAATCATGGAGGAAGTTTTTGTATAAGGTGGAGGGTCAGAGTTTCTTAGATGTTCCTCCACTTGTTGTTCAGTTAACAAGTCTCACTTGTGGAGGAATGATTCTATGCACTGCAATCAACCACAGCCTATGCGACGGGATCGGAACATCTCAATTCCTCCACGCATGGGCACATCTCACCACATCCCCTCAAACTAATTTGGCCATCCCACCCTCCCACTCACGCCACGTGTTGCACCCACGACAACCACCCATAGTAAACCTCCATAACCCCACATACACCCGAACACAACCACACCCTCAAATAAACATCCACAAATCAATCCAATCACAACCCTTAATACCCACATCATTTACCTTTAATTCCGCCCATATCCTCTACTTAAAAAAACAATGCACCCCCTCACTAAAATGCACCACCTTTGAAGTAATCGCAGCGCACACGTGGCGCTCTTGGATTCGTTCATTAAATTTACCATTATCGTTACCCTCCACACTAAACGTGAAACTACTATTCTCTGTTAACTTTCGCACCTTTATGAATTTACCAAAAGGATATTACGGAAATGGGTTCTTACTAGCGTGCGCCGAAAGTAAAATAGAGGACTTAGTGGGGAATAATAATAACCTTCACTATGTTGTGAAGTTAGTGCAAAAGGCGAAATCAACGGTGAATGATGAGGAATATATAAGATCAACAGTTGATTTGTTGGAGGATAAAATGGTAAAAACAGATGTTTCGACTAGTTTGGTTATTTCACAATGGTCGAAACTAGGGTTAGAAGATGTGGATTTTGGAGAGGGAAAACCGTTGCATATGGGTCCTTTAACTAGTGATGTTTATTGTTTATTTTTACCGGTTATTGGCGGTGGTGGTGATGGTGTGAGAGTGGTGGTTTCTGTGCCGGAGAGTATGGTAGAGAGTTTTGAGTATCAGATGAGTGAAAGTTGGGAGGAGAAAATGGAAAATGGAGATAAGGTTATGAATGGATTTCATGCGAATGAAATTTCGCTTTTGTGA 1401 0.4069 MSKSKELPNCTYPCEPVTKIPPSAPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVNLNNLKSSLSRVLVDYYPLAGRLRRCSSSLDDDIDDEKKLEVDCNGKGALFVEAFMDITADELVEQSKLPNKSWRKFLYKVEGQSFLDVPPLVVQLTSLTCGGMILCTAINHSLCDGIGTSQFLHAWAHLTTSPQTNLAIPPSHSRHVLHPRQPPIVNLHNPTYTRTQPHPQINIHKSIQSQPLIPTSFTFNSAHILYLKKQCTPSLKCTTFEVIAAHTWRSWIRSLNLPLSLPSTLNVKLLFSVNFRTFMNLPKGYYGNGFLLACAESKIEDLVGNNNNLHYVVKLVQKAKSTVNDEEYIRSTVDLLEDKMVKTDVSTSLVISQWSKLGLEDVDFGEGKPLHMGPLTSDVYCLFLPVIGGGGDGVRVVVSVPESMVESFEYQMSESWEEKMENGDKVMNGFHANEISLL* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0374 466 Gene3D - 16 222 IPR023213 -
Psa5g0374 466 Pfam Transferase family 20 441 - -
Psa5g0374 466 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 449 - -
Psa5g0374 466 Gene3D - 239 445 IPR023213 -
Psa5g0374 466 PANTHER BNAC03G58010D PROTEIN 17 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0374 Psa-Chr5 28898833 28902549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0374 18 402 Monolignol Biosynthesis Gene Families AT5G48930 28.369 2.58e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0374 - - aip:107645267 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0374 5 28898833 28902549 Psa5g0374 5 28898833 28902549 ECH