Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0371 ATGGCGACTCCGGTCGAGCCTCCGAACGGGATAAGAGCGGACGGGAAGCATTATTACTCCATGTGGCAAACTCTATTTGAGATCGACACTAAATATGTTCCGATTAAGCCGATTGGTCGAGGGGCGTATGGGATTGTGTGTTCTTCTGTTAATAGGGAGACAAATGAGAAAGTTGCGATCAAGAAGATACAGAACGCGTTTGAGAATCGTGTTGACGCGCTTAGAACTTTGAGGGAGCTTAAACTTCTTCGGCATCTTCATCATGAGAATGTTATTGCTTTGAAAGACATCATGATGCCTGTTCATAGGACTAGTTTTAAGGATGTTTATCTGGTTTATGAACTTATGGACACTGATTTGCATCAGATTATTAAATCTTCTCAAACATTGTCTAATGATCACTGCCAATATTTCCTCTTTCAGTTGCTTCGGGGTTTGAAATATCTACACTCAGCTAACATCCTTCATCGCGACTTGAAACCTGGAAATCTTTTAATTAATGCAAATTGTGACCTGAAAATATGTGATTTTGGGTTAGCACGCACAAACTGCAGCAAGAACCAGTTCATGACGGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAACTGCTACTTTGCTGTGACAACTATGGGACATCTATTGACGTCTGGTCAGTGGGATGCATCTTTGCAGAGCTCCTTGGACGAAAACCTATTTTCCCTGGTTCAGAGTGTCTCAACCAACTAAAGCTTATTATCAATATCCTTGGTAGTCAAAGGGAGGAGGATATCGAATTTATTGATAACCCAAAAGCTAAGAGGTACATCAAATCACTTCCGTATTCTCCTGGAACCCCCTTTTCCCGACTTTACCCCAATGCACATCCGCTGGCAATTGATCTACTAGCTAAGATGCTTGTTTTTGATCCCACAAAGAGGATTAGTGTTACGGAAGCACTTCAACACCCTTTCATGGCCTCTCTCTATGATCCTAATTGTGATCCTCCTGCCATCATTCCAATTGATCTTGACATTGATGAGGATCTAGGGGAAGAGATGATAAGGGAGTTGATGTGGAGGGAAATGGTTCATTACCATCCTGGATCTGCTATGGGAAATGCAGAGTTGTCGTCTTGA 1119 0.4254 MATPVEPPNGIRADGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPVHRTSFKDVYLVYELMDTDLHQIIKSSQTLSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKRYIKSLPYSPGTPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPFMASLYDPNCDPPAIIPIDLDIDEDLGEEMIRELMWREMVHYHPGSAMGNAELSS* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0371 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 365 - -
Psa5g0371 372 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0371 372 CDD STKc_TEY_MAPK 26 361 - -
Psa5g0371 372 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Psa5g0371 372 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Psa5g0371 372 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Psa5g0371 372 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Psa5g0371 372 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0371 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Psa5g0371 372 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Psa5g0371 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 365 - -
Psa5g0371 372 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0371 Psa-Chr5 28136823 28139549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0371 1 370 MAP Kinase Gene Family AT1G10210 84.865 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Psa5g0371 Pkinase 2.5e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0371 K20535 - gmx:100798863 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0371 5 28136823 28139549 Psa5g0371 5 28136823 28139549 ECH