Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0345 ATGGCTTTAACAAAATCAACCAAACTTCCTCAAACACAACTCATCAAACAAATCCTTAAAAGATGTTCAAGTCTAACCAAAAAACAACAACAACAATCCTACGACGATCATCGTTTACATGTTCCTAAAGGTCACTTTGTTGTCTATGTTGGTGAAAACCGAAGCAGGTACATTGTTCCCATCTCCTTCCTAACTCGACCAGAGTTTCAAAACCTCTTACATCAAGCTGAAGAAGAGTTCGGATTCGATCATGACATGGGTCTTACCATCCCTTGCGACCAAGATGTTTTCGAGTCTCTTACTTCCATGCTCAGATAG 318 0.3994 MALTKSTKLPQTQLIKQILKRCSSLTKKQQQQSYDDHRLHVPKGHFVVYVGENRSRYIVPISFLTRPEFQNLLHQAEEEFGFDHDMGLTIPCDQDVFESLTSMLR* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0345 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 105 IPR003676 GO:0009733
Psa5g0345 105 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 105 - -
Psa5g0345 105 Pfam Auxin responsive protein 21 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0345 Psa-Chr5 24829970 24831095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0345 3 104 Calmodulin-binding Proteins AT4G34750 39.216 7.99e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0345 K14488 - tcc:18591528 168.703