Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0337 ATGAATTCTTCACTCATTCATGAATATCATTCTTCTTCCACAATGGATATGCTACGTTCTGAGCCTATGCAACTTGCTCAATTGATCATTCCAATTGAAGCAGCTCATCAAACCATCTCTTACCTCGGCGATCTCGGTCTTTTTCAATTCAAAGATCTTAATGGCGATAAAAGCCCGTTCCAAAGAACTTATGCTTCTCAGGTTAAAAGATGCGGAGAAATGACGCGAGCAATGCGGTTATTCAAAGAACAAATGACAAAGGCTGATATATCCCCCACGACACGATTAACACGAAATGCTGGTGTTGATCTTGAAAAATTAGAGAGTAAACTGGCGGAACTTGAAGTTGATCTACTCGAGATTAATGCGAATAATGAGAAGTTGCAGCATTCTTATAATGAGCTTTTAGAGTATAAGCTTGTTCTAGAGAAGGTTGGAGAGTTCTTTCCTTCGGCGCAAAATAGTGCTGTAGTTCGCCAAAGAGAATTTGGAGTTCAACCGATTGTCGAAGGGTCTATTGACAGCCCATTATTAATCGAACAAGAGAGAACAGCATATCTGATAAACCAGATTAAACTCGGGTTTATATGCGGTCTTGTTAATAGGGAAAAATCGATTCCGTTCGAAAGAATTTTATTTCGTGCTACTAGAGGAAATGTGTTTTTGAAACAAGCTATGGTTGAAGATTATGTTGTGGATCCTTTATCAAGAGAGAAGGTTTATAAAAATGTGTTTGTTATATTTTATTCTGGAGAGAGGATAAAAAGTAAAATTACCAAAATTTGTGATGCTTTTGGAGCAAATCGTTATCCTTTTGCAGATGATTTGGGTAAACAATTTCAAACAATGACAGAGGTGTCAGGAAGACTTGCAGAATTAAAGACAACTATAGATATGGGTTTACTTCACCGAAGCAATTTGTTGCAGACAGTTGGATATGAATTTGAGCAATGGAACCTTTTGTTGAAGAAGGAAAAATCCATTTATCACATTCTAAATATGCTAAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGATGGTGTCCTCTTTCTGCAACAAGTCAGATTCAGAAGGTATTGTTGCAGGCAACTACAGACTGTAGCTCTCAAGTTGGGGCAATATTCCAAGTTTTACAGACAAAGGAGTTACCTCCTACCTATTTTTGCACAAATAGTTTTACTTCTTCTTTTCAAGAAATTGTAGATGCATATGGAATTGCCAAATATCAAGAAGCAAATCCCGGTGTATACACGATCATTACGTTTCCGTTCCTTTTCGCTGTAATGTTTGGCGATTGGGGTCATGGCATATGCTTATTACTCGCAACTTTGTATTTCATAATAAACGAGAAAAGGTTTTCTTCTCAGAAACTTGGAGACATATTAGAAATGGTTTTTGGTGGAAGATATATTATTTTGATGATGTCTCTCTTCTCAATTTACACCGGATTTATATACAACGAGTTCTTCTCGATTCCTTTCGAACTATTCGGACCAACGGCCTATGCATGTCGTGATCCTTCATGCAGGGATGCTACTACCATAGGTTTGATAAAAGTGCGTAACACTTATCCATTTGGCGTCGATCCTAAATGGCATGGTAGTCGTAGCGAACTTCCATTTCTTAACTCTCTGAAAATGAAGATGTCGATTCTTCTAGGAGTATCTCAGATGAATCTCGGAATCATATTGAGTTACTATAACGCAAAATACTTTGAAAACAACATAAATATATGGCACCAGTTTGTTCCGCAGGTGCTATTCTTGAATAGCCTATTTGGATACCTTTCACTCCTCATAATTGTAAAATGGTGCACTGGATCAGAAGCTGACCTCTACCATGTGATGATATACATGTTCCTAAGTCCAACAGATGATTTGGGTGAAAACCAACTCTTTGCTGGCCAGAAGTTTCTTCAAATTATGTTACTACTTTTGGCGCTTGTAGCTGTACCATGGATGTTATTGCCAAAGCCTTTTCTCCTAAAGAAACAACATACAGAAAGGCATAAAGGTGAATCTTACTCTCTGCTCTTTGCCGGCGATGATCCTCTTGAATCACAGCCAGACGGTGCTCACCATGACAAGGATGATTTTGATTTCAGTGAGATTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTGTCCAATACTGCTTCATATCTTCGTTTATGGGCCCTCAGTCTAGCTCATTCAGAGTTGTCAAGTGTTTTCTATGACAAAGTCTTACTTCTGGCACTAGGGTATAACAATACTATTGTTCTCATTGTTGGTATTGTCGTTTTTATAAGCGCGACCGGTGGCGTCTTGTTAATAATGGAAAGCCTAAGTGCTTTCTTGCATGCTTTAAGACTTCATTGGGTAGAGTTCCAGAACAAATTTTATGAGGGAGATGGTTACAAGTTCTTCCCATTTGCATTTGCAACACTTGGTGATGAGGATGGATTGTAG 2472 0.3823 MNSSLIHEYHSSSTMDMLRSEPMQLAQLIIPIEAAHQTISYLGDLGLFQFKDLNGDKSPFQRTYASQVKRCGEMTRAMRLFKEQMTKADISPTTRLTRNAGVDLEKLESKLAELEVDLLEINANNEKLQHSYNELLEYKLVLEKVGEFFPSAQNSAVVRQREFGVQPIVEGSIDSPLLIEQERTAYLINQIKLGFICGLVNREKSIPFERILFRATRGNVFLKQAMVEDYVVDPLSREKVYKNVFVIFYSGERIKSKITKICDAFGANRYPFADDLGKQFQTMTEVSGRLAELKTTIDMGLLHRSNLLQTVGYEFEQWNLLLKKEKSIYHILNMLSINVTKKCLLAEGWCPLSATSQIQKVLLQATTDCSSQVGAIFQVLQTKELPPTYFCTNSFTSSFQEIVDAYGIAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIINEKRFSSQKLGDILEMVFGGRYIILMMSLFSIYTGFIYNEFFSIPFELFGPTAYACRDPSCRDATTIGLIKVRNTYPFGVDPKWHGSRSELPFLNSLKMKMSILLGVSQMNLGIILSYYNAKYFENNINIWHQFVPQVLFLNSLFGYLSLLIIVKWCTGSEADLYHVMIYMFLSPTDDLGENQLFAGQKFLQIMLLLLALVAVPWMLLPKPFLLKKQHTERHKGESYSLLFAGDDPLESQPDGAHHDKDDFDFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLALGYNNTIVLIVGIVVFISATGGVLLIMESLSAFLHALRLHWVEFQNKFYEGDGYKFFPFAFATLGDEDGL* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0337 823 Coils Coil 97 131 - -
Psa5g0337 823 PIRSF ATP6V0A1 13 822 IPR026028 GO:0000220|GO:0046961
Psa5g0337 823 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 15 823 - -
Psa5g0337 823 PANTHER VACUOLAR PROTON ATPASES 15 823 IPR002490 GO:0033179|GO:0046961|GO:1902600
Psa5g0337 823 Pfam V-type ATPase 116kDa subunit family 41 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0337 Psa-Chr5 23946723 23959591 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0337 15 821 Primary Pumps ATPases(2) AT2G21410 70.508 0.0 1204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0337 K02154 - gmx:100805813 1327