Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0306 ATGTGTACCTTGCTGCTAAGTTTCATATTATTGGGAGGAATTGTTTCTTACACAACTCATGCCATACAATTTCCACCAAATGCTTCATTTCCAGCAGTGTTTGCTTTTGGAGATTCAATCATGGATACAGGTAACAACAATAATAACATGAAAACACTTGCTAAGTGCAATTTTCCTCCATATGGAAAAGATTTCAAAGGAGGCATCCCAACCGGTCGGTTTTGCAATGGAAAAGTTCCATCAGACTTTCTAGTTGAAGTATTAGGTGTTAAAGAACTTCTTCCTGCATATTTGGATCCAAATATCCAACCTAGCGATCTCATCACCGGTGTTTGCTTTGCATCCGGTGGTGCCGGATATGATCCTCTCACGTCTCAAATAGCGGCAGTTATATCGTTGTCCGATCAACTAGAATTGTTCAAAGAATACATAGGAAAGCTAAAAGGACTTGTTGGAGAGGATAGAGCAAACTTCATCATAGAAAATAGTATGTATTTTGTTGTTCAAGGAAGCAACGACATTTCCAATACGTATTTTTTTACTCATGTTCGAGAAGTACAATACGACGTTCCCGCTTACGCTGATCTCATGCTCAACGCCGCTACAAATTTCTTAACGGAAATATATAAACTTGGTGCAAGAAAGATAGGAGTTTTCAGTGCTCCACCAATTGGATGTGTGCCTTTTCAAAGAACACTTGCTGGAGGAATTGAGAGAAAATGTGCTGAAAAAATCAATGATTTATGCAAGTTATTTAACACTAAATTATCAAAGGAGTTGAGTTCTCTTAACCACAACTTGATTAATTCAAGGATCGTTTACCTTGATGTTTATACACCTCTTCTTGACATCATTGTAAACTATCAAAATTATGGTTATAAAGTTGGAGACAAAGGATGTTGTGGCACAGGTGAAGTAGAGGCATCAGTGTTATGCAATCAATTGTCTACTACGTGTGAAAATGCTAATGACTATGTTTTTTGGGACAGTTTTCATCCCACAGAGACCGTCCATATGAAGCTTGTAGATTCACTTAATCGAAAATATTCGCACCTATTTCTCTAG 1065 0.3756 MCTLLLSFILLGGIVSYTTHAIQFPPNASFPAVFAFGDSIMDTGNNNNNMKTLAKCNFPPYGKDFKGGIPTGRFCNGKVPSDFLVEVLGVKELLPAYLDPNIQPSDLITGVCFASGGAGYDPLTSQIAAVISLSDQLELFKEYIGKLKGLVGEDRANFIIENSMYFVVQGSNDISNTYFFTHVREVQYDVPAYADLMLNAATNFLTEIYKLGARKIGVFSAPPIGCVPFQRTLAGGIERKCAEKINDLCKLFNTKLSKELSSLNHNLINSRIVYLDVYTPLLDIIVNYQNYGYKVGDKGCCGTGEVEASVLCNQLSTTCENANDYVFWDSFHPTETVHMKLVDSLNRKYSHLFL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0306 354 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 33 44 IPR008265 GO:0006629|GO:0016298
Psa5g0306 354 CDD SGNH_plant_lipase_like 31 345 IPR035669 -
Psa5g0306 354 Pfam GDSL-like Lipase/Acylhydrolase 33 342 IPR001087 GO:0016788
Psa5g0306 354 PANTHER GDSL ESTERASE/LIPASE EXL3 15 347 - -
Psa5g0306 354 SUPERFAMILY SGNH hydrolase 32 344 - -
Psa5g0306 354 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 15 347 - -
Psa5g0306 354 Gene3D SGNH hydrolase 19 350 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0306 Psa-Chr5 22129981 22132150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0306 1 345 Pollen Coat Proteome AT1G75910 39.773 1.23e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0306 - - gmx:100793604 528.865