Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0274 ATGTTGCATTCTGAAGATGCTGCTATTCATTATGAAGCGTTATTGGATTACTTAGCTCATGCTGCTCTGAAAGTCATAGGGGAAGAGGCATTGTTACTTGGACAGTTTGCAGCAACTGATTCAGACTGCAAGGTTCACATTGTACAGAGAGGCGCTGTCCGACCATTGATAGAGATGCTTTCGTCTTTTGATGTACAACTCAGAGAAATGTCTTCCTTTGCACTAGGGAGATTGGCCCAGGACACACATAACCAAGATAGTATTGCACACAATGGTGGCTTAGTGCCACTGCTTAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGAGAATGAGGATAATGAGGTCATTTCAACCTGCTAA 396 0.4268 MLHSEDAAIHYEALLDYLAHAALKVIGEEALLLGQFAATDSDCKVHIVQRGAVRPLIEMLSSFDVQLREMSSFALGRLAQDTHNQDSIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAENEDNEVISTC* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0274 131 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 26 125 IPR044282 -
Psa5g0274 131 SMART arm_5 40 80 IPR000225 GO:0005515
Psa5g0274 131 SMART arm_5 81 121 IPR000225 GO:0005515
Psa5g0274 131 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2-LIKE 26 125 - -
Psa5g0274 131 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 92 126 IPR000225 GO:0005515
Psa5g0274 131 Pfam Armadillo/beta-catenin-like repeat 82 117 IPR000225 GO:0005515
Psa5g0274 131 SUPERFAMILY ARM repeat 13 124 IPR016024 -
Psa5g0274 131 Gene3D - 2 130 IPR011989 -
Psa5g0274 131 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 51 93 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0274 44 125 U-box Gene Family AT5G40140 37.805 6.62e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0274 - - cpap:110808280 191.815