LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa5g0274	ATGTTGCATTCTGAAGATGCTGCTATTCATTATGAAGCGTTATTGGATTACTTAGCTCATGCTGCTCTGAAAGTCATAGGGGAAGAGGCATTGTTACTTGGACAGTTTGCAGCAACTGATTCAGACTGCAAGGTTCACATTGTACAGAGAGGCGCTGTCCGACCATTGATAGAGATGCTTTCGTCTTTTGATGTACAACTCAGAGAAATGTCTTCCTTTGCACTAGGGAGATTGGCCCAGGACACACATAACCAAGATAGTATTGCACACAATGGTGGCTTAGTGCCACTGCTTAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGAGAATGAGGATAATGAGGTCATTTCAACCTGCTAA	396	0.4268	MLHSEDAAIHYEALLDYLAHAALKVIGEEALLLGQFAATDSDCKVHIVQRGAVRPLIEMLSSFDVQLREMSSFALGRLAQDTHNQDSIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLAENEDNEVISTC*	132

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa5g0274	131	PANTHER	ARM REPEAT PROTEIN INTERACTING WITH ABF2	26	125	IPR044282	-
	Psa5g0274	131	SMART	arm_5	40	80	IPR000225	GO:0005515
	Psa5g0274	131	SMART	arm_5	81	121	IPR000225	GO:0005515
	Psa5g0274	131	PANTHER	ARM REPEAT PROTEIN INTERACTING WITH ABF2-LIKE	26	125	-	-
	Psa5g0274	131	ProSiteProfiles	Armadillo/plakoglobin ARM repeat profile.	92	126	IPR000225	GO:0005515
	Psa5g0274	131	Pfam	Armadillo/beta-catenin-like repeat	82	117	IPR000225	GO:0005515
	Psa5g0274	131	SUPERFAMILY	ARM repeat	13	124	IPR016024	-
	Psa5g0274	131	Gene3D	-	2	130	IPR011989	-
	Psa5g0274	131	ProSiteProfiles	Armadillo/plakoglobin ARM repeat profile.	51	93	IPR000225	GO:0005515

Showing 1 to 9 of 9 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Psa5g0274	44	125	U-box Gene Family	AT5G40140	37.805	6.62e-09	50.8

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa5g0274	-		-	cpap:110808280	191.815

Showing 1 to 1 of 1 entries