Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0257 ATGAGTGCCCTAATCGCACCTCTGAAATATCCCGCTGCTCGTAGAGACGACACCGTCGTCGACGACTACCACGGCGTCAATGTCGCCGACCCCTATCGATGGCTCGAAGATCCTGATGCTGAAGAAGTGAAAGAGTTTGTTGAGAAACAAGTTCAACTCACCAATTCAGTGATCGCAGAATGCGAAACAAGATCGAAACTTAATGAAAGAATCACCAAACTGTTTGATCATCCTCGTTATGATGCTCCGCTTCAGCGAGGCGATAAGTATTTTTACTTCCATAACACTGGTCTTCAGCCTCAGGATATTCTCTATGTCCAGGATAGTTTGGAGGGAGAGCCAGAGGTTTTGCTTGATCCCAATGCCTTAAGTGAAGATGGAACTGTGTCGTTGAACACATTTTCTGTGAGTGAAGATGCCAAGTACTTGGCTTATGCGCTTAGTTCCAGTGGTAGCGATTGGGCGACTATAAAAGTGATGCGTATTGAGGACAAGACTGTTGAGCCTGATACTTTATCATGGGTTAAATTTTCTTCTATTAGTTGGAGTCATGATGGCTTGGGTTTCTATTATAGCCGCTATCCAGCACCCAAAGATGGAGAAGTGGTAGATGCTGGGACTGAGACAAACTCTAATCTTTATCATATGCTTTATTATCATTTTTTGGGTACGGATCAAGAAGGAGATATTTTGTGTTGGAAAGATCTTCAAAACCCTAAATATACAGTTGGAGGAATTGTTACTGATGATGGGAAGTATCTCCTCCTCTATATTTCAGACGGGTGTGATCCAGTTAACAAACTTTACTACTGTGACATAACTAATCTTCCCAGCGTATTTGAAGGTTTTCGTAGTGATAATTCCGTCCTCCCTTTCATCAAACTTATTGATAACTTTGATGCGAAGTACGACTACATTGCAAATGATGACACCGTGTTTACGTTTTTAACTAATAAAGATGCTCCTAAGTATAAACTAGTCCGAGTAGATTTGAAGAAACCAAACACATGGGCTGATGTTCTTCAAGAGTCTAAAAATGATGTACTTGAGTCGGCATGTGCTGTAAATGGTAACCAACTGATAGTTAGTTACTTGAGTGATGTGAAGCATCTCCTACAAGTAAGAGACTTAAAAACAGGTTCATTGCAGCATCAACTGCCAATTGACATTGGCACAGTTTATGGCATTTCTGCACGGCGTGAAGATAATGTGGTTTTCTTTAGCTTTACAAGCTTTCTATCTCCCGGTATCATTTATCAGTGCAATCTGGGAACCGGGATTCCTGATCTGAAGATATTTCGTGAAATTGCGGTCCCTGGGTTTGATCGCTCTGAGTTTCAAGTCAATCAGGTTTTTTTCCCTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCGAAAAAGGGTATTATTTTGGATGGTTCACACCCGTGTCTATTATATGGATATGGTGGTTTTAACATCAGTATCACACCGTCATTTAGTGTTAGTCGCATTGTACTCACAAAACATTTAGGTTTTGTTTACTGCGTTGCGAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGTTCCCTTGCTAAAAAGCAGAATTGCTTTGATGACTTCATTTCTGCAGCCGAATACCTTGTATCCACTGGTTATACTCAATCCAGAAAGTTATGCATCGAGGGTGGAAGCAATGGCGGACTTCTTGTTGGTGCTTGTATAAATCAGAGACCTGATCTCTTTGGCTGTGCATTGGCTCATGTTGGCGTTATGGACATGCTGCGGTTCCACAAATTTACCATAGGTCATGCTTGGACCTCAGATTATGGTTGTGCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAGTACTCACCATTGCATAATGTCCGGCGACCATGGGAAGAGCATCCTGACAAGTCAGTTCAGTACCCACCAACCATGCTGTTGACCGCAGATCACGATGATCGAGTTGTGCCACTACACTCATTGAAGCTATTGGCGACCATGCAGTATGAGCTATGCAGTAGTTTAGAGGAAAGTCCCCAAACAAACCCTATAATTGGTCGCATTGACTGCAAAGCTGGACATGGAGGAGGTCGTCCAACACAGAAAATGATCGATGAAGCTGCTGATCGATTCAGTTTTATGGCTAAAATGTTAGAAGCACATTGGATTGAATAG 2187 0.422 MSALIAPLKYPAARRDDTVVDDYHGVNVADPYRWLEDPDAEEVKEFVEKQVQLTNSVIAECETRSKLNERITKLFDHPRYDAPLQRGDKYFYFHNTGLQPQDILYVQDSLEGEPEVLLDPNALSEDGTVSLNTFSVSEDAKYLAYALSSSGSDWATIKVMRIEDKTVEPDTLSWVKFSSISWSHDGLGFYYSRYPAPKDGEVVDAGTETNSNLYHMLYYHFLGTDQEGDILCWKDLQNPKYTVGGIVTDDGKYLLLYISDGCDPVNKLYYCDITNLPSVFEGFRSDNSVLPFIKLIDNFDAKYDYIANDDTVFTFLTNKDAPKYKLVRVDLKKPNTWADVLQESKNDVLESACAVNGNQLIVSYLSDVKHLLQVRDLKTGSLQHQLPIDIGTVYGISARREDNVVFFSFTSFLSPGIIYQCNLGTGIPDLKIFREIAVPGFDRSEFQVNQVFFPSKDGTKIPMFIVAKKGIILDGSHPCLLYGYGGFNISITPSFSVSRIVLTKHLGFVYCVANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSTGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCADKEEEFHWLIKYSPLHNVRRPWEEHPDKSVQYPPTMLLTADHDDRVVPLHSLKLLATMQYELCSSLEESPQTNPIIGRIDCKAGHGGGRPTQKMIDEAADRFSFMAKMLEAHWIE* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0257 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 478 496 IPR002470 GO:0004252|GO:0006508
Psa5g0257 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 505 529 IPR002470 GO:0004252|GO:0006508
Psa5g0257 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 533 552 IPR002470 GO:0004252|GO:0006508
Psa5g0257 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 563 583 IPR002470 GO:0004252|GO:0006508
Psa5g0257 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 645 667 IPR002470 GO:0004252|GO:0006508
Psa5g0257 728 SUPERFAMILY Peptidase/esterase 'gauge' domain 6 439 - -
Psa5g0257 728 Pfam Prolyl oligopeptidase family 493 723 IPR001375 GO:0006508|GO:0008236
Psa5g0257 728 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 11 426 IPR023302 GO:0004252
Psa5g0257 728 SUPERFAMILY alpha/beta-Hydrolases 446 672 IPR029058 -
Psa5g0257 728 PANTHER PROLYL ENDOPEPTIDASE 2 728 - -
Psa5g0257 728 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 2 728 - -
Psa5g0257 728 ProSitePatterns Prolyl endopeptidase family serine active site. 540 570 IPR002471 GO:0004252|GO:0006508
Psa5g0257 728 Gene3D - 78 437 - -
Psa5g0257 728 Gene3D alpha/beta hydrolase 19 718 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0257 Psa-Chr5 19089116 19096799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0257 478 672 Carbohydrate Esterase AT5G36210 27.136 2.95e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0257 K01322 - gmx:100776544 1281.93