Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0240 ATGTCGAGTGCAATGAGGTCTATCATATTTGAGATCGATGATGGAACGAACATATCAAGAGGTCTCTTTGAGTTTACTCGCCGTAGAGGAGTGGGAATATGTGTTCTTGGTGGATACGGAGTGGTATCACAAGTCACACTTCGTCAATCCGATGAAAGAACTTTAATCCTCAATGGAAGGTTCACCATTCTTTCGATATCTGGAACAATTCTCCCTCCACCAACACCAGAGAGTGCAGAAAGCTTAACAGTTTATGTATCGGATACTACAGGGCAGGTGATAAGTGGGATTGTGGTCCCCCCTCTTGTGGCTTCGGGTCTAGTTGTGTTAGCAGCTGCTTCCTTTTCAAATGTTGCTTGA 360 0.4444 MSSAMRSIIFEIDDGTNISRGLFEFTRRRGVGICVLGGYGVVSQVTLRQSDERTLILNGRFTILSISGTILPPPTPESAESLTVYVSDTTGQVISGIVVPPLVASGLVVLAAASFSNVA* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0240 119 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 117 IPR014476 GO:0003680
Psa5g0240 119 CDD DUF296 6 112 IPR005175 -
Psa5g0240 119 Gene3D - 5 119 - -
Psa5g0240 119 Pfam Plants and Prokaryotes Conserved (PCC) domain 6 117 IPR005175 -
Psa5g0240 119 ProSiteProfiles PPC domain profile profile. 2 119 IPR005175 -
Psa5g0240 119 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 4 117 - -
Psa5g0240 119 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0240 Psa-Chr5 17701832 17703047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0240 3 118 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 46.610 3.01e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0240 - - minc:123202979 109.768