Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0224 ATGCTTGAGGGTGTAGATTATTATTCTCCTCCATTTACAATGTTTGAAAGCGATGATTACAATAAAAACAATGATTTTCTGGTTGTTGTTCATGATGATGATGATGTTGATGTTATTGATGATGATGATGACGATAAATCAGAGGATTTTAAGAATCTGAAACCAATCACAAAGGGGAAACCTCCAAGGCATGTGTCTGGTTTGAGACACAGCCTTAGCTCAACCAGATTGATGCAGGCTGTAGCAAATTTGGGTGTAGATGCCGGGGTAACTGGAAGTAAGTCATCTTCTCAAGACAAGACAGATTATCTACCCATATTTCGATCAGGAAGTTGTGCTGAGAGAGGGCCTAAACAATATATGGAAGATGAACACATATGTATAGATGATCTTACTCAACACATAGGTTCTGCTTCAAATCTTCCTTTTCCTGGAGCTTTCTACGGGGTGTTTGATGGTCATGGAGGAACAGATGCTGCTTTGTTTGTAAGAAATAACATCCTTAGACTCATTGTTGAGGACTCTCAATTTCCAACTTGTGCGGGGAAAGCAATTACAAGTGCGTTTATGAAAGCCGATTATGCATTTGCAGATTCCAGCTCGCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGGAGGAACATGATAATTGCGAATGCGGGGGATTGTCGAGCTGTATTGGGGAGACGAGGTAGAGCGGTTGAGATGTCAATAGACCAGAAACCAAATTGCATTTCAGAAAGGCTAAGGATTGAAAAACTTGGTGGAGTGGTATATGATGGATACTTGAACGGCCAATTATCTGTTTCGCGTGCCTTAGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTGCCCTTTGAGTGCTGAGCCAGAGTTGCAGGAAGTCTGTCTGACCGAGGATGATGAGTTTTTGATTATGGGCTGCGATGGCCTGTGGGATGTAATGAGTAACCAATGTGCTGTGACCATGGCAAGAAAAGAGTTGATGATACATAATGATCCAGAAAGGTGTTCAAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAACTCGTGTGATAATTTAACAGTTATTGTCGTATGTTTCTCCCCTGATCCTCCTCCTAGAATAGAGATACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAAGTCTCACTTTACTTAAGGGTGTATTAGAGTGTTAG 1206 0.4245 MLEGVDYYSPPFTMFESDDYNKNNDFLVVVHDDDDVDVIDDDDDDKSEDFKNLKPITKGKPPRHVSGLRHSLSSTRLMQAVANLGVDAGVTGSKSSSQDKTDYLPIFRSGSCAERGPKQYMEDEHICIDDLTQHIGSASNLPFPGAFYGVFDGHGGTDAALFVRNNILRLIVEDSQFPTCAGKAITSAFMKADYAFADSSSLDISSGTTALTALVFGRNMIIANAGDCRAVLGRRGRAVEMSIDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSAEPELQEVCLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPERCSRELVREALKRNSCDNLTVIVVCFSPDPPPRIEIPPSRVRRSISAESLTLLKGVLEC* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0224 401 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 35 390 - -
Psa5g0224 401 SMART PP2C_SIG_2 123 368 IPR001932 -
Psa5g0224 401 Pfam Protein phosphatase 2C 109 360 IPR001932 -
Psa5g0224 401 ProSitePatterns PPM-type phosphatase domain signature. 147 155 IPR000222 GO:0043169
Psa5g0224 401 ProSiteProfiles PPM-type phosphatase domain profile. 108 368 IPR001932 -
Psa5g0224 401 SMART PP2C_4 98 366 IPR001932 -
Psa5g0224 401 CDD PP2Cc 107 368 IPR001932 -
Psa5g0224 401 PANTHER PROTEIN PHOSPHATASE 2C 35 390 IPR015655 GO:0004722|GO:0006470
Psa5g0224 401 SUPERFAMILY PP2C-like 103 369 IPR036457 -
Psa5g0224 401 Gene3D - 87 371 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0224 Psa-Chr5 15981433 15984263 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0224 8 400 PP2C-type Phosphatase Gene Family AT2G33700 70.051 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0224 K14803 - gmx:100778015 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0224 5 15981433 15984263 Psa5g0224 5 15981433 15984263 ECH