Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0212 GATGTGTTAGAGAAGATTACAACATTTTCCCATAGTCTCTCAAAAAATGTAACCATTATATCTGCAAATGGGACAGTTTCTAAAGTAAGATTTTCTGAATCTTCATCATCTGCTGAAACTGTGACCTATGAGGGACGATTTGAGATCCTATCACTTAAAGGCTCTGTGTTTGTTGGCACAAATGAAAGTGAACAGAAAAGATTTGGTGGAGTAAAGGGGTCATTTGTTTCATTATCAAATAGTCGTGTATTTAGTGGTAAAGTTGCTGATATTTTGATTGCTGCTACTCCAATTCAGATAATATTGGGGAGTTTCTTTTCGGAGGATCGAGAAGTAGTATTGTCCGGTCCAAATGAGCCTCATGCAGAAGGCCCAAGCAACCCTTCGTCGACAATTCACTCATCGATGGGAATATTGATATCGTAG 426 0.385 DVLEKITTFSHSLSKNVTIISANGTVSKVRFSESSSSAETVTYEGRFEILSLKGSVFVGTNESEQKRFGGVKGSFVSLSNSRVFSGKVADILIAATPIQIILGSFFSEDREVVLSGPNEPHAEGPSNPSSTIHSSMGILIS* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0212 141 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 108 - -
Psa5g0212 141 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 119 IPR039605 GO:0003680
Psa5g0212 141 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 1 119 - -
Psa5g0212 141 Gene3D - 1 115 - -
Psa5g0212 141 ProSiteProfiles PPC domain profile profile. 1 129 IPR005175 -
Psa5g0212 141 CDD DUF296 1 105 IPR005175 -
Psa5g0212 141 Pfam Plants and Prokaryotes Conserved (PCC) domain 1 105 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0212 Psa-Chr5 15259737 15261111 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0212 1 108 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 46.364 7.68e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0212 - - cam:101507512 103.99