Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0211 ATGTCGGGATCTGGATTAAGGAACGAGTGTGAGTTCCCTCCTGGATTCGACAAACCTTATGAATCACCACCACAACCACATCTATTGGGTTCACAAAGTACCTTTCCTCGCCATCTTTCTCCTCTTCCTTCTGAACATATAAATCATCCGCTTGAAATTATTAACCACTCTGATGTGCCATTTTCTCCAACTGCTCCTTTGTCTCCCACCTCAACCAACACTCCTAAGAAGCGTAGAGGTCGGCCTTTCGGTTCTCGCAACAAAAAGCCATGTATGGATATCATTAACGTGTCTAAAATAAAATTTTCTCAATCTCCGTCATTTGTTGAAACTGTGACCTATGAGGGACGATTTGAGATTTTATCACTAAAAGGTTCTGTGTTTGTTGGCACAAATGAAAGTGAACAAAAAAGAGTTGGTGGAGTAAAGGGGTCTTTTGTTTCATTATCAAATAGTCATGCATTTGGTGGTAAAATTGTTGATGTTTTGATTGCTGCTACTTCAGTTCAGATAATACTGGGGAGTTTCTATTCGGAGGGTCGAGAAGTAGTATTGTCCAATCCAAATGAGCCTCATGTAGAAGGTCCAAGTAACCCTCTCTCGGTGGTTCATCCATCAACATGA 624 0.4103 MSGSGLRNECEFPPGFDKPYESPPQPHLLGSQSTFPRHLSPLPSEHINHPLEIINHSDVPFSPTAPLSPTSTNTPKKRRGRPFGSRNKKPCMDIINVSKIKFSQSPSFVETVTYEGRFEILSLKGSVFVGTNESEQKRVGGVKGSFVSLSNSHAFGGKIVDVLIAATSVQIILGSFYSEGREVVLSNPNEPHVEGPSNPLSVVHPST* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0211 207 MobiDBLite consensus disorder prediction 1 40 - -
Psa5g0211 207 MobiDBLite consensus disorder prediction 65 88 - -
Psa5g0211 207 Gene3D - 94 187 - -
Psa5g0211 207 MobiDBLite consensus disorder prediction 188 207 - -
Psa5g0211 207 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 97 190 - -
Psa5g0211 207 SUPERFAMILY AF0104/ALDC/Ptd012-like 108 179 - -
Psa5g0211 207 Pfam Plants and Prokaryotes Conserved (PCC) domain 109 176 IPR005175 -
Psa5g0211 207 CDD DUF296 94 176 IPR005175 -
Psa5g0211 207 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 97 190 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0211 Psa-Chr5 15222483 15225257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0211 97 193 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 41.121 5.95e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0211 - - cam:101507512 95.9005