Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0189 ATGTCTAACCATGACAATGAGAGAAACCACAAGCTTCGTCCATTCACGACACCACAATTGCAATTCCAAACACCAGGCACTGATACCACCACAGAAAACCACCATCGCACACTATCCTCCACAATCGCTCGCCGCCCTCGTGGGCGTCCCCTTGGCTCCAAAAATAAGCCTAGGATTCCTGCCATAGTCACTCATGACCGTCCTGATGCACTAACTTCTCATGTTCTTGAGATCACAACTGGTTCAGATGTTTTAAAGAGTCTTTTTAATTACACTCGTCGTAATGGGAGGGGTATTTGCATCCTCGGGGGAAATGGAGTGGTGACGTATATCAAGCTTCGTCAACCAACAGGACCAAAGGGACGTACGTTTGGGGGAAGTGTGATGTCCCCTATGGTGGCGTCGGACTCAATAACTTTGATGGTTGTTTCTTTTGCAAACATTGCACCTGAAAAAATTTCTTCGATGGCATAA 474 0.4662 MSNHDNERNHKLRPFTTPQLQFQTPGTDTTTENHHRTLSSTIARRPRGRPLGSKNKPRIPAIVTHDRPDALTSHVLEITTGSDVLKSLFNYTRRNGRGICILGGNGVVTYIKLRQPTGPKGRTFGGSVMSPMVASDSITLMVVSFANIAPEKISSMA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0189 157 ProSiteProfiles PPC domain profile profile. 68 157 IPR005175 -
Psa5g0189 157 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 24 121 - -
Psa5g0189 157 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 118 152 - -
Psa5g0189 157 MobiDBLite consensus disorder prediction 13 37 - -
Psa5g0189 157 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 152 - -
Psa5g0189 157 MobiDBLite consensus disorder prediction 1 55 - -
Psa5g0189 157 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 121 IPR014476 GO:0003680
Psa5g0189 157 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 118 152 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0189 Psa-Chr5 13845758 13846339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0189 23 153 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 35.393 5.25e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0189 - - cam:101492608 136.346