Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0168 ATGCTCCTCATGCTACATTCCTTTCTTCATTCACATTTCACAAACCCTAATCTTGCTCCTCTTTCTTCATCTTCATTTCATTTTTCAATATTCCATTTCAATCGAAGATGCAGACTCGCGGTTCAAGAAAGAGGGCAAACGCTGAACCAATTGTTCTTAACCCTAAAAAGCAGAGGGGTTGTTTTGGGGGATCTTCCCAATTTACAGAATGCCAGTGTTTCTGAAAATCAATCCAATGGAAAACTCCAAACTCGGAAGAATTCCAAGGTCAAGAAATCTGCAGCAACAGATGTTTATTTGTTTGATAGTTTCAGTTTGGATAACCCGATGCAGAAAAAGAGAAGACCTATGGTTGGATACATTGAGAATGTTCAGAGATTCATTACTACAAACATGAGGGGAATATTGGTGGATTGGTTAGTTGAAGTTGCGGAAGAGTACAAGCTTCTCCTCAACCCTTCATCGTTGTTTTTTCTTACATTGATAGGTTCCTATCTATCCATGTTGTCAACAGATCCAAACTTCAGTTGCTTGGAGTTTCTTGCATGCTTGTTGCCTCGAAATATGAAGAAATACTCCACCAAAGGCGGTTGA 594 0.3939 MLLMLHSFLHSHFTNPNLAPLSSSSFHFSIFHFNRRCRLAVQERGQTLNQLFLTLKSRGVVLGDLPNLQNASVSENQSNGKLQTRKNSKVKKSAATDVYLFDSFSLDNPMQKKRRPMVGYIENVQRFITTNMRGILVDWLVEVAEEYKLLLNPSSLFFLTLIGSYLSMLSTDPNFSCLEFLACLLPRNMKKYSTKGG* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0168 197 Gene3D - 116 151 - -
Psa5g0168 197 PANTHER CYCLINS 111 168 IPR039361 -
Psa5g0168 197 PANTHER CYCLIN-A3-1-RELATED 111 168 - -
Psa5g0168 197 SUPERFAMILY Cyclin-like 99 185 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0168 Psa-Chr5 11272066 11273092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0168 55 168 Core Cell Cycle Gene Families AT5G43080 35.938 2.06e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0168 K06627 - gmx:100787417 94.7449