Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa5g0159 | ATGGCTGAATCTAAGTACAAATGCTTTATTGATGGACTTGCTCAGGACACTGACGGCTATGCTCTTGTTGAAGTATTTTCTTCCTTTGACAAAATCATCGAAACAAAGGTCATCGTTGATAATGAAATTGGAAGATCGAGCAAATCTGGAATCGTCACATTTGCATCGGAGCAGGCAATGAAAGAAGCCATTAAAACGATGCACGGTCAGGAGCTAGATGGCAATAAAATCACTGTGAGCGAGATTCAAAGCCACGACAGTGGTGTTGATAAAAATTGA | 279 | 0.405 | MAESKYKCFIDGLAQDTDGYALVEVFSSFDKIIETKVIVDNEIGRSSKSGIVTFASEQAMKEAIKTMHGQELDGNKITVSEIQSHDSGVDKN* | 93 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa5g0159 | 92 | Gene3D | - | 1 | 84 | IPR012677 | - | |
Psa5g0159 | 92 | SMART | rrm1_1 | 7 | 80 | IPR000504 | GO:0003723 | |
Psa5g0159 | 92 | PANTHER | GEO13361P1-RELATED | 2 | 88 | - | - | |
Psa5g0159 | 92 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 6 | 84 | IPR000504 | GO:0003723 | |
Psa5g0159 | 92 | SUPERFAMILY | RNA-binding domain, RBD | 4 | 84 | IPR035979 | GO:0003676 | |
Psa5g0159 | 92 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 9 | 77 | IPR000504 | GO:0003723 | |
Psa5g0159 | 92 | PANTHER | RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED | 2 | 88 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa5g0159 | Psa-Chr5 | 9941051 | 9942073 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa5g0159 | 9 | 91 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 34.884 | 1.63e-08 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa5g0159 | - | - | gmx:547560 | 97.4413 |