Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0157 ATGGCTGATGCCAATTCTCCGACGACATCTCCGCCGTCTGATTCATCACAATCCCCGCCGCCTCCGTCACCAGACAATTCTAATAATTCATCACCACCACCAGCCGGTGACAATTCATCTCCACCGCCGTCATTATCCCCGCCACCATCGTCTCCACCTCCATCATCCCCTCCTCCGTCATCTCCCTCTCCACCTCCGCCTTCTCAGTCATCTCCCTCTCCACCTCCACCTTCTCAGTCATCTCCCTCTCCACCTCCACCTTCTGGCTCTTCCCCGTCTCCACCATCACCACCGCCACCACCGTCACCACAAGGAAAAACGCCATCACCTCCAAACCGGCAAGATTTTTCTCCTCCTCCGCCACCGCATCCTCGTTTGTCACCACCTAAATCATCTCACTCGCATAACAACAATAATTCAAATGAAAATAATGAAAACCAATTCAGCACCGGGGCTATAATAGGAATTGCAAGTGGAGCTGGTCTATTGCTCCTTGTCCTTTCAATACTCCTTATTGTATGTTCAAGAAGAAAGAAGAGATCGCCACAACCTCACCTTCAATTCTACAACCATCATCAATCACACGGTCCTAATCAATATGAGTACAATAACCGTGATCACGTACTTAATATTCCTCCACCACCAGGTGGTGGTGGAGGTGGTGGAGGTTGGGGCCCTCCACCACCAAGAGGTGGTGGAGGTGGAGGTTGGGGTCCACCACCACCTCCGGGTGGTGGTGGAGGTTGGGGTTTACAGCCTGCAAACAGTCTACCTCCCCAGCACCTAAGCAGTGACATGAGTACCTCGAGTTTCTCCGGGTCGCAAGGTCCTGTATTGCCACCACCTCATCCAACGGTTGCACTCGGGTTCAACCAGAGCTCGTTCACTTTCGATGAGTTATCGGTTGCTACTGGCGCTTTCGCACATCAAAACCTGTTGGGCCAAGGTGGATTTGGATATGTACATAAAGGTGTTCTTCCTAATGGTAAAGAAATAGCAGTAAAGAGCCTTAAAGCAACCAGTGGACAAGGTGATAGAGAATTCCAAGCCGAAGTTGATACTATCAGCCGTGTCCATCATCGCTATCTTGTTTCGCTTGTTGGATATTGCATTTCGGATGCTAAAAAGCTTCTTGTTTATGAGTTTGTTCCTAACAAGACACTTGAATATCACCTTCATGGAAAGGGTCGACCTGTGATGGATTGGAGCACAAGGCTTAAAATCGCGCTTGGATCAGCCAAAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATCATTCACCGAGACATAAAGGGTGCAAACATTTTACTCGAAAACAACTTTGAAGCAAAAGTGGCAGATTTTGGATTGGCAAAGTTTAATCAAGACGCTAACACTCATGTTTCTACCCGCGTCATGGGAACATTTGGGTATATGGCCCCTGAGTATGCATCGAGCGGTAAGCTAACTGATAAATCGGATGTCTTCTCGTACGGTGTTATGCTTTTGGAGCTCATAACTGGACGACGACCAGTTGGAACCAGCGGTGATTATGAAGAAGATAGTTTGGTTGATTGGGCTAGACCACTTTGTAATAAAGCATTGGAAAATGGAATACTTACTGGATTAGTCGATATACGATTAGAGGACAATTATGACAAAAACGAGCTAACACGAATGATAGCTTGTGCTGCTACTAGTGTTAGGCACTCGGCAAAAAGGCGTCCGAAAATGAGTCAGATTGTTAGAGTACTCGAGGGAGATTCGTCGCTCGAAGCGCTTCATCAGGACGGAGTTAAAGCGGGAAATAGTACTATGTACAGCAGCGCGAGTGGAGATTATGATGCAGGAGCATACAGTGCTGATATGAAAAAGTTCAAGAAACTAGCATTGGAAAGCGGCGTAGCAAGCAGCGATTACGGTGGAACGAGTGAGTATGGTCTCAATCTTTCCATCTCAACCAGTGAACAATCTTCTTCCGATTATAGCAAGAGGACTGCAACTGGAACAGGAAGCCGGATCAACACTCCATGA 2019 0.4745 MADANSPTTSPPSDSSQSPPPPSPDNSNNSSPPPAGDNSSPPPSLSPPPSSPPPSSPPPSSPSPPPPSQSSPSPPPPSQSSPSPPPPSGSSPSPPSPPPPPSPQGKTPSPPNRQDFSPPPPPHPRLSPPKSSHSHNNNNSNENNENQFSTGAIIGIASGAGLLLLVLSILLIVCSRRKKRSPQPHLQFYNHHQSHGPNQYEYNNRDHVLNIPPPPGGGGGGGGWGPPPPRGGGGGGWGPPPPPGGGGGWGLQPANSLPPQHLSSDMSTSSFSGSQGPVLPPPHPTVALGFNQSSFTFDELSVATGAFAHQNLLGQGGFGYVHKGVLPNGKEIAVKSLKATSGQGDREFQAEVDTISRVHHRYLVSLVGYCISDAKKLLVYEFVPNKTLEYHLHGKGRPVMDWSTRLKIALGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFNQDANTHVSTRVMGTFGYMAPEYASSGKLTDKSDVFSYGVMLLELITGRRPVGTSGDYEEDSLVDWARPLCNKALENGILTGLVDIRLEDNYDKNELTRMIACAATSVRHSAKRRPKMSQIVRVLEGDSSLEALHQDGVKAGNSTMYSSASGDYDAGAYSADMKKFKKLALESGVASSDYGGTSEYGLNLSISTSEQSSSDYSKRTATGTGSRINTP* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0157 672 MobiDBLite consensus disorder prediction 259 276 - -
Psa5g0157 672 Pfam Protein tyrosine and serine/threonine kinase 310 522 IPR001245 GO:0004672|GO:0006468
Psa5g0157 672 SMART serkin_6 307 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0157 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Psa5g0157 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK5 8 631 - -
Psa5g0157 672 MobiDBLite consensus disorder prediction 1 140 - -
Psa5g0157 672 MobiDBLite consensus disorder prediction 13 128 - -
Psa5g0157 672 SUPERFAMILY Protein kinase-like (PK-like) 287 580 IPR011009 -
Psa5g0157 672 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 8 631 - -
Psa5g0157 672 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Psa5g0157 672 Gene3D Transferase(Phosphotransferase) domain 1 383 599 - -
Psa5g0157 672 ProSiteProfiles Protein kinase domain profile. 307 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa5g0157 672 Gene3D Phosphorylase Kinase; domain 1 284 382 - -
Psa5g0157 672 MobiDBLite consensus disorder prediction 648 672 - -
Psa5g0157 672 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0157 Psa-Chr5 9878013 9881735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0157 160 635 Trihelix Transcription Factor Family AT1G70460 50.207 6.39e-151 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Psa5g0157 PK_Tyr_Ser-Thr 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0157 - - cam:101505888 723.391